Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01825 ATGATGCCCCCTCAGCAAGAAACAGCTGTTACATCTAACATTCCGGCCAACCCCCACGGCCCGGAAAACAGCTCCGTCCACGCCGAACCACCTTCCTCCGCCGCCAATCTCATTCACAACAACAATAATTCTCGCCACCACCCACCACCTAATTCACCACCCAAATTTTCTGTTCTTCACCAATCCCTTCGCCCCGTTACCCTCAAATTTGAGGATGTTTCCCATAGCATAACTTTTGGAAGTGACAAAAATGGTTGTGTATCTTCTCAAAAATCAAAGCACACAAGGACGGTGTTGAACGGTGTGACTGGTATGGTGGGGCCAGGGGAGGTGATGGCAATGTTGGGTCCCTCAGGGAGTGGCAAGACCACTTTACTCACAGCCCTCGCCGGCCGTCTCGCCGGAAAACTCTCCGGCGCCATCACGTACAACAACCAGCCTTTCTCTAGCTCCATGAGGCGCAACATAGGGTTTGTGTCCCAAGATGATGTGTTGTATCCTCACCTCACTGTGGTTGAGACTCTGACTTATGCTGCCATGTTGAAACTTCCAAAAAGTTTGACAAGGGAAGAGAAAATGGAGCAAGCTGAGATGATAATTGGGGAACTAGGGTTGTCCCGGTGTCGAAACAACCTCGTTGGTGGTGGTGGCGCCCTGTTCCGGGGGATATCAGGTGGGGAGCGAAAGCGGGTCAACATAGGACAAGAGATGTTGGTGAATCCAAGTTTGTTGTTGCTTGATGAACCAACGTCAGGGTTGGATTCCACGACGGCGCAACGCATCGTGGCAATGCTTCAGAGTGTTGCCCGGCGCGGTCGGACGGTGGTGACCACCATTCACCAGCCTTCAAGCAGGTTGTATTGGATGTTTGATAAGGTGTTGTTGTTATCAGATGGATACCCAATTTTCACTGGACAAGCATGTCAGGTCATGAATTATCTTGAGTCCATTGGATTTGTGCCCACTTTCAATTTCATCAACCCAGCTGATTTTCTGCTTGATCTTGCTAATGGTGTAGTTGTTGATGTCAAAGAAGATGAACATTTAGATCACTATGAGGATCAAGCTTCAGTCAAACAATTCCTAGTTTCATCGTATAAGAAGAATGTATATCCTCTTCTAAAGCAAGAGATTCAACAAAATCATAGAGAACAAACATTTTTGGCTCCAGGAACACTTAGAAGTTCTGATAACCAATGGACAACTAGCTGGTGGGAACAATTCATGGTTTTGCTTCAAAGGGGTTTAAAGGAGAGGAGGCATGAATCTTTTTCTCACCTAAGGATCTTCCAAGTCTTCTCTGTCTCAATTCTCTCAGGACTTCTATGGTGGCATTCTGATTCCTCACATGTACAAGACCAGGTAGGCCTGTTATTCTTCTTTTCCATCTTCTGGGGGTTCTTCCCTCTCTTCAATGCCATCTTTGCTTTTCCTCTGGATCGACCAATGTTGGTGAAAGAAAGATCATCAGGCATGTACCAGTTATCCTCCTATTATGTTGCCAGGACAGTTGGGGACTTACCAATGGAGCTTGTGCTTCCTACTATCTTTGTAACAATATCTTATTGGATGGGGGGTCTAAAGCCTTGTTTTGTTACATTTGTGTTTACTCTCTTGATAATGCTTTTGAATGTGCTAGTTTCTCAAGGAATAGGCCTAGCACTTGGAGCCATTCTGATGGATGTCAAACAAGCCACAACCTTAGCTTCAGTGACTATGTTAGTGTTTCTTTTAGCAGGGGGTTACTACATTCAACAAATTCCATTCTTTATATCTTGGTTGAAGTACATTTCTTTCAGTCACCATTGCTATAAGCTTCTTGTAGGAGTGCAATACTCAATGAATGAGGTGTATCAGTGTGGACAGGGGTTACATTGTAAGATCAGAGATTTTCCTGCCATAAAGTGTCTAGGGCTTCATAATTTGTGGAAAGATGTGGTTGTGTTGATCATAATGTTGATTGGATATAGAGTTGTGGCATACCTAGCTTTGAGGAAGAGGCTACATCATTGCTAG 2016 0.4499 MMPPQQETAVTSNIPANPHGPENSSVHAEPPSSAANLIHNNNNSRHHPPPNSPPKFSVLHQSLRPVTLKFEDVSHSITFGSDKNGCVSSQKSKHTRTVLNGVTGMVGPGEVMAMLGPSGSGKTTLLTALAGRLAGKLSGAITYNNQPFSSSMRRNIGFVSQDDVLYPHLTVVETLTYAAMLKLPKSLTREEKMEQAEMIIGELGLSRCRNNLVGGGGALFRGISGGERKRVNIGQEMLVNPSLLLLDEPTSGLDSTTAQRIVAMLQSVARRGRTVVTTIHQPSSRLYWMFDKVLLLSDGYPIFTGQACQVMNYLESIGFVPTFNFINPADFLLDLANGVVVDVKEDEHLDHYEDQASVKQFLVSSYKKNVYPLLKQEIQQNHREQTFLAPGTLRSSDNQWTTSWWEQFMVLLQRGLKERRHESFSHLRIFQVFSVSILSGLLWWHSDSSHVQDQVGLLFFFSIFWGFFPLFNAIFAFPLDRPMLVKERSSGMYQLSSYYVARTVGDLPMELVLPTIFVTISYWMGGLKPCFVTFVFTLLIMLLNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQQIPFFISWLKYISFSHHCYKLLVGVQYSMNEVYQCGQGLHCKIRDFPAIKCLGLHNLWKDVVVLIIMLIGYRVVAYLALRKRLHHC 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01825 671 MobiDBLite consensus disorder prediction 1 58 - -
Spst2g01825 671 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 68 323 IPR003439 GO:0005524
Spst2g01825 671 Pfam ABC-2 type transporter 280 344 IPR043926 GO:0140359
Spst2g01825 671 Pfam ABC transporter 99 251 IPR003439 GO:0005524
Spst2g01825 671 SMART AAA_5 108 301 IPR003593 GO:0016887
Spst2g01825 671 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 317 IPR027417 -
Spst2g01825 671 Gene3D - 84 317 IPR027417 -
Spst2g01825 671 Pfam ABC-2 type transporter 406 612 IPR013525 GO:0016020|GO:0140359
Spst2g01825 671 ProSitePatterns ABC transporters family signature. 223 237 IPR017871 GO:0005524|GO:0016887
Spst2g01825 671 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 41 661 - -
Spst2g01825 671 MobiDBLite consensus disorder prediction 1 46 - -
Spst2g01825 671 FunFam ABC transporter G family member 22 86 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01825 Spst-Chr2 17337765 17341475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01825 98 284 Calmodulin-binding Proteins AT2G36910 28.638 8.36e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01825 K05681 - gmx:100810165 1100.12