Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01824 ATGGAGCCGACTCAATCCAATGACGTTCAGGAATACCCACAAACCCTGATCTCAGAGCCCAAAGATTGTCTCATGCAAGACGGCAACGAGTCCCTGTTCGATTCGATGGTTTGCGACTCCACTTCAAGGCTCATCCCAACCGGGTTTACCAGAAACGCGGAAGAGGAATGCTTAATGTTTGTAAATGCTGGAGGGGATGCTTTCAGTGAAGCATCAGGTGGAGTAACGTTCCTGGGTGACACCTATTTTGATGGTGGCTACGTTCTGCGTACCGATGAGCGAATAGTGGAGGGTGGCGACTACTCATTTATCTATCAATCAGCTCGGTTCGGAAGCTTTTGTTATAGGTTTGATAATATTCCTCCCGGAGACTATTTTGTTGATCTACATTTTGCGGAGATCATTATCATAAATGGGCCAAAAGGAATGAGGGTGTTCAATGTTCTGTCTGAATTGGATATCTATGCAGTTGTTGGAGCCAATAAGCCACTACAGTTGGTTGATTCAAGGGTGTCTGTGAAGGATGATGGGTTGATTCTCATAAGATTTGAAGGTATATTTGGAAGCCCAGTCGTTAATGGGATTTGCATTAGGAGAGCAACGAAGGACTCTGTTCCACCAGTGACAAGTGATCACATTAAATGTAGCTACTGTGCAGCACAGATTGAAATTCCTTCCTCCCAGATGAAAGATATGCGGGCAAAGTCTACAGCAAAGTATGAGAGTAAGATAAAGGAGCTCACAATGCGGTGTGAGCTCAAGGCTAAAGAATGCTATGAGGCATGGATGTCATTAGCTGCTACAAATAAGCAATTGGAGACAGTCCATATGGAACTTGACAAACTGACAATTAAGTCATACGCTACATATCAAACTGTGGAGAAACAAGCTGAAAGCCTGAGGAATATTTCTTATAGGTATGAGCTTGATAAGAAGAAATGGGCAGATGAAATTAACAGTTTACAAGAAAAAATAAAGTTGATAAAAAGTGATTATTCAAAACTTTCCTTGGAAGCGCATGAATGTGTTGATTCGATTCCTGAATTAAATAAGATGGTTTTTTCTGTTCAGGAGTTGGTTAAACAGTGTGAAGATCTCAAAGTGAAGTACAACGAAGAGATGACAAAGAGAAAGAAACTCTTCAATGAAGTTCAAGAGGCTAAAGGGAACATTCGGGTTTTCGGTCGATGTCGTCCATTGAATAACGCTGAAATCTCAGTTGGGTGCAATACAGTTGTGGATTTTGACGCAGCAAAGGATGGATGCCTTGGAATTTTGACAAGTGGCTCCACCAAAAAATCATTCAAATTTGACAGAGTTTTTACACCAAAAGATGATCAAGTTGATGTTTTTGCTGATGCATCATCAATGGTGATCTCTGTACTGGATGGCTACAATGTTTGCATCTTTGCTTATGGGCAAACAGGAACAGGGAAGACATTCACCATGGAAGGAACACCGCAGAACAGAGGAGTAAATTACAGGACTCTTGAGCACTTGTTTAAAGTTAGTAAGGAAAGGAGTGAAACTTTTTCATATGACATATCTGTTAGTGTGGTTGAGTCTAAGCAGGAAACTGAAGTAGCTGGAATGACTTATCTTGAAATGGTTATCAGGTTGGAGGTAAAACAAGCTTCTGAAGGATTTCATCATGTTCCTGGTGTTGTAGAAGCCAAGATTGATAACATAAATGAAGTGTGGAATGTACTGCAAACTGGAAATAATGCTAGAGCAGTTGGAAGTAACAATGTTAATGAGCATAGCAGTCGATCTCACTGGTACCAAGACCTTGCTAAAAATTTGTTGAATGGGGACTGTACCAAGAGCAAGCTTTGGCTTGTGGATTTGGCAGGTAGTGAGAGGCTTGCAAAGACTGACGTTCAAGGGGAACGACTTAAGGAAGCCCAAAATATCAATCGATCTCTATCTGCTCTTGGAGATGTAATATCTGCTTTAGCAGCTAAAAGTAGTCACATTCCATATAGTCCATCGGACCAGGACGTAGGTGAGACACTGAGCTCACTTAATTTTGCAACTAGAGTGAGGGGTGTTGAGTTAGGTCCTGTTAAGAAGCAAATTGATACAAGTGAACTTCAAAAGTTGAAAACAATGCTTGAAAAAGCACGGAGTGATTGCAGGATTAAAGATGAATCTATGAGAAAACTTGAAGAAAATTTGCAAAGTTTGGAGAGTAAGGCCAAAGGCAAGGATCAAATTTACAAAAATCTACAAGAAAAGATTAAAGAACTTGAAGGACAAATTGAGTTGAAAAAAGCCATGCAAAGTGAGTCAGAGAAACAAATCTCTCAATTATCTGACAAATTGAGAGGGAAAGAACAAACCTGCAGTTCTCTCCAACAAAAGGTGAGAGAGCTAGAGAGAAGGATGAAAGAACAACTCCAGTCAGAGTCAGCAAATTTTCAACAGAAGGTTTGGGATCTAGAGAAAAGGCTGAAAGATCAGATGCAAGGCTCTGACTCTGAATCTGTCATTTTGAAAGATAAGATCAAAGAGCTTGAGAGGAAACTGAAAGAGCAGGAACAGAGCTCAATGTCCATGCTTCATCAACAGATGAAGGAACTGGAAGACAGGTACAGAGAGCGAGAGCAGCATTGGCAACAAACACAGAGTTATGTGGATGCAGTAAAGGCCACACCAGATATAGGTAAAAATTACATGAATGAAGAATGTCCAAGTGAGATTGAGGCTGGCATTTTAAGGTGTTCAGACTCAGTAAACCGCCAGATAAGCCGAGACTATTCTTCGTTCAAAGGGAGTGATTCCACCAATAAGATAAGAAACAAAAGAAGAGAGTTTAGAAGCAATGATGAAAACAACTTTGTCTTGCCATCATCGTTGCCCGATAAAAAAGTCACCAGGAAATCTGATCCACCCAAAATAGGGAGGAGTGTGAGGCCATTATCAAGACCAACCACTGCCAATCAAGCTCCAGTCTCTCACAAGAGAGCTAGCACAAGCAGAGATCTGGTTCAAGGAATCAGAGAGAGGGAAAATAAGAAAAAAATTTGGTCATGA 3036 0.4084 MEPTQSNDVQEYPQTLISEPKDCLMQDGNESLFDSMVCDSTSRLIPTGFTRNAEEECLMFVNAGGDAFSEASGGVTFLGDTYFDGGYVLRTDERIVEGGDYSFIYQSARFGSFCYRFDNIPPGDYFVDLHFAEIIIINGPKGMRVFNVLSELDIYAVVGANKPLQLVDSRVSVKDDGLILIRFEGIFGSPVVNGICIRRATKDSVPPVTSDHIKCSYCAAQIEIPSSQMKDMRAKSTAKYESKIKELTMRCELKAKECYEAWMSLAATNKQLETVHMELDKLTIKSYATYQTVEKQAESLRNISYRYELDKKKWADEINSLQEKIKLIKSDYSKLSLEAHECVDSIPELNKMVFSVQELVKQCEDLKVKYNEEMTKRKKLFNEVQEAKGNIRVFGRCRPLNNAEISVGCNTVVDFDAAKDGCLGILTSGSTKKSFKFDRVFTPKDDQVDVFADASSMVISVLDGYNVCIFAYGQTGTGKTFTMEGTPQNRGVNYRTLEHLFKVSKERSETFSYDISVSVVESKQETEVAGMTYLEMVIRLEVKQASEGFHHVPGVVEAKIDNINEVWNVLQTGNNARAVGSNNVNEHSSRSHWYQDLAKNLLNGDCTKSKLWLVDLAGSERLAKTDVQGERLKEAQNINRSLSALGDVISALAAKSSHIPYSPSDQDVGETLSSLNFATRVRGVELGPVKKQIDTSELQKLKTMLEKARSDCRIKDESMRKLEENLQSLESKAKGKDQIYKNLQEKIKELEGQIELKKAMQSESEKQISQLSDKLRGKEQTCSSLQQKVRELERRMKEQLQSESANFQQKVWDLEKRLKDQMQGSDSESVILKDKIKELERKLKEQEQSSMSMLHQQMKELEDRYREREQHWQQTQSYVDAVKATPDIGKNYMNEECPSEIEAGILRCSDSVNRQISRDYSSFKGSDSTNKIRNKRREFRSNDENNFVLPSSLPDKKVTRKSDPPKIGRSVRPLSRPTTANQAPVSHKRASTSRDLVQGIRERENKKKIWS 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01824 1011 SMART kinesin_4 388 692 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst2g01824 1011 MobiDBLite consensus disorder prediction 974 993 - -
Spst2g01824 1011 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 390 720 IPR027417 -
Spst2g01824 1011 PANTHER KINESIN-LIKE PROTEIN KLP-3 65 778 IPR027640 GO:0003777|GO:0007018
Spst2g01824 1011 Coils Coil 705 817 - -
Spst2g01824 1011 PRINTS Kinesin heavy chain signature 582 599 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst2g01824 1011 PRINTS Kinesin heavy chain signature 464 485 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst2g01824 1011 PRINTS Kinesin heavy chain signature 610 628 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst2g01824 1011 MobiDBLite consensus disorder prediction 929 943 - -
Spst2g01824 1011 Gene3D - 686 850 - -
Spst2g01824 1011 MobiDBLite consensus disorder prediction 994 1011 - -
Spst2g01824 1011 MobiDBLite consensus disorder prediction 919 1011 - -
Spst2g01824 1011 Gene3D - 53 203 - -
Spst2g01824 1011 Coils Coil 822 871 - -
Spst2g01824 1011 Coils Coil 356 390 - -
Spst2g01824 1011 Coils Coil 311 338 - -
Spst2g01824 1011 ProSitePatterns Kinesin motor domain signature. 609 620 IPR019821 GO:0003777|GO:0005524|GO:0007018
Spst2g01824 1011 Gene3D Kinesin motor domain 335 685 IPR036961 -
Spst2g01824 1011 Pfam Malectin domain 59 195 IPR021720 -
Spst2g01824 1011 ProSiteProfiles Kinesin motor domain profile. 390 661 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst2g01824 1011 Pfam Kinesin motor domain 396 664 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst2g01824 1011 SUPERFAMILY Tropomyosin 696 883 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01824 Spst-Chr2 17327060 17333008 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01824 362 738 Calmodulin-binding Proteins AT5G65930 36.098 5.52e-60 222