Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01818 ATGGTGAACTTGGGGAGGAGAAGAATGAGGGGTGAAAGGAGAAGGAAGTTGCATCTTAGTAAGATCTATTCATTTGCATGTGGGAAACAATCTCTCAAGGAGGATCATTCGCAGATAGGAGGGAGAGGGTATTCGAGGGTGGTGTTTTGCAATGAACCAGAGAGCTTTGAGGCTGGGATAAGGAGTTACGCTGATAATTCCGTGAGCTCTACTAAGTATAATCTTGCTACTTTCTTGCCTAAGTCACTTTTTGAGCAGTTTAGGAGGGTGGCTAATTTCTTTTTTTTGGTAACTGGCATCTTGGCCTTCACAAAGCTTGCTCCTTATACAGCTGTCAGTGCTATCCTTCCTCTGATTATTATTATTGGAGCAACTATGATCAAAGAGGGCATTGAAGATTGGCGAAGGAAACAGCAGGATATTGAGGTCAATAGCAGAAGAGTTAAAGTGCATACAGGGCAAGGAACCTTTGAATATACTGAGTGGAAGAATCTGAAGGTGGGGCATATAGTGAAGATAATGAAGGACGAATTCTTTCCTGCAGACCTCCTACTGCTTTCTTCCAGTTACGAGGATGCATTCTGCTATGTTGAGACCATGAACTTGGATGGGGAGACAAATTTGAAGTTAAAACAAGGGTTGGAAGTAACTTCTTCCTTACATGAGGACTTTCAATTCAGTGATTTTCAAGCAACAATCAAATGTGAAGACCCAAATGCAAATTTATATTCATTTGTTGGGAGCATGGAGTATAAAGAACAGCAGTATCCCCTTTCTCCCCTGCAACTTCTTCTGAGAGACTCTAAACTTCGTAACACAGACTACATATTTGGAGCTGTCATCTTCACTGGTCATGACACAAAGGTCATTCAGAATTCCACTGATGCTCCTTCAAAGAGAACCAAGGTTGAGAAGAAGATGGATAGGGTTGTCTACTTCATGTTTTGTATTGTGTTTCTAATGGCATTTGTTGGATCGATTTTCTTTGGCATCACAACTAAAGATGACTTGGACAATGGATTGATGAAAAGGTGGTACCTAAGACCAGACGACTCTACAATTTTCTTTGATCCTAAAAGAGCACCAGCTGCTGCTATATTTCATTTTTTTACAGCCTTAATGTTATATGGTTTCTTCATTCCCATCTCATTGTATGTTTCAATAGAAATTGTTAAAGTCCTTCAGAGCATCTTCATCAATCAAGATATCCATATGTACTATGAAGATGCAGACAAACCTTCTTATGCCCGAACTTCAAACTTGAATGAGGAACTTGGTCAAGTTGATACAATACTTTCTGATAAAACTGGAACTCTGACCTGCAACACGATGGAGTTCATCAAATGTTCGATTGCTGGGGTAGCTTATGGCCGTGGAGTTACAGAGGTTGAGAGGTCATTGGATAGCAAAAATGGTTCTACTTTGATTGACGACACAAGGGATTCTCCTGTCAGAAATGTTCCCATCAAAGGATTTAACTTTACAGATGAAAGGATAATGAATGGAAAATGGGTCAATGAGCCTTATGCTAATGTTATTAAGAATTTTTTTCACTTATTGGCAATCTGCCATACAGCCCTACCAGAAGTTGATGAGGATACAGGAAATGTCTCATATGAAACTGAATCCCCAGATGAATTGGCATTTGTGATTGCAGCGAGAGAAATTGGTTTCAAATTCTATAAAAGGACTCAGACTAGTTTATCAATATATGAATTGAATCCAGTTTCTGGTGACAAAATTGAAAGGACATACAAACTTCTAAATGTTTTAGAATTCAATAGCACAAGGAAGCGAATGTCAGTGATTGTGAAAGATGAAGAAGGGAGAATTTTGTTACTATGTAAAGGTGCTGACAGTGTCATGTTTGAGAGGCTTGCCAAGGATGGGAGGGAGTTTGAAGAGAAAACCTTGGAACATGTGCATGAATATTCTGATGCAGGTCTAAGGACTCTAATTTTGGCATATCGTGAACTTGATGAAAACCAATACAAGGAGTTTGATAATAATTTTTCTCAAGCGAAAAATTCAGTTAGTGAAGATCGGGAAACACTGATTGAGGAAGTATCAGAAAAGATTGAGAGGAATTTAATCCTTCTTGGTGCCACTGCTGTAGAGGACAAGCTCCAAAACGGGGTTCCTGATTGCATTGACAAGCTTTCCCAAGCTGGAATTAAGATCTGGGTTTTGACTGGGGATAAAATGGAGACTGCCATCAATATTGGTTTTGCTTGTAGTTTACTTAGACAAGGAATGAAACAAATTATAATTCAATTGGAAAGTCCAGAAATTCAAGCATTGGAGAAGGCTGGAGACAAGGTGGCCATTGTTAAGGCTTGTAGAGAAAATATCCGCCATCAAATATCTGAAGCTGCTCAGCAGATTACTGCCTCCAGAGGAACCTCTCAGCAAGCATTTGCTCTAATTATCGATGGAAAATCACTTGCTTATGCCCTAGAGGATAATATGAAGAAAATGTTTTTAGACCTTGCAACTCGTTGTGCATCTGTTATCTGCTGTCGTTCCTCACCAAAGCAGAAGGCACTGGTCACTAGACTGGTAAAATCAGCTACTGGTAAAACTACATTAGCTATTGGTGATGGAGCTAATGATGTGGGAATGCTTCAAGAAGCAGATATAGGGATTGGAATCAGTGGCGTTGAAGGAATGCAGGCGGTTATGTCTAGTGATATTGCAATTGCACAGTTCTGTTATTTGGAAAGGTTACTTCTTGTACATGGACATTGGTGTTACCGAAGGATCTCATCAATGATATGCTACTTCTTCTACAAAAACATCACATTTGGCTTCACTCTATTCTTATATGAGGTGTATGCATCATTCTCTGGGCAACCTGCATACAATGACTGGTTTTTGTCGGTCTATAATATCTTCTTTTCTTCACTGCCCGTGATTGCACTAGGGGTATTTGACCAGGATGTGTCTGCTCGGTACTGTTTGAGGTTTCCTATGTTGTATCAAGAAGGCGTGCAAAATCTTCTCTTTAGCTGGCGTCGAATTTTCAGCTGGATGCTTAATGGCTTTATTAGTGCCATAATAATCTTCTTTTTCTGCACAAAGGCAATGGAGATTCAAGCCTTTGATGAGAAGGGAAGAACTGCTGGGAGGGATATACTCGGAGCAACAATGTATACTTGTGTGGTTTGGGTTGTGAACTTGCAAATGGCTGTTGCTATAAATTACTTCACCTTGATTCAACATATTTTCATCTGGGGTTCCGTTGCTATCTGGTACCTTTTCCTCCTGGCATATGGAGCAATGTCTCCCACCATTTCCGGAAATGCTTACAAAGTCTTCGTTGAAACTCTTGCACCATCGCCTTCCTTTTGGTTTGTGACATTGGTTGTCGTGATCTCAGCACTCATCCCATACTTCTCTTACTCAGCAATACAGATGAGGTTCTTTCCCATGTATCACGAAATGGTACAATGGGTAAGGTATGAGGGAAAGACAAATGATCCTGAATTTGTTGCTATGGTGCGGCAAGGATCATTGCGGCCAACAACTGTTGGTTCTACAGCTCGCTTAGCGGCTAAGGATAATGACCTTAAGGACATTATGGAATTGCTTACTGGCTCCTCTCAAGCAGAAAGCGATGTTGCTTACATCCACTTGGTAATGGAATGGTGCACACAACCAAACCATCATTTGGACGTGAAGGCCTGCCATTTGGCTAAACAAGCTTTTGATGAGGCAATTGCAGAGTTGGACACCCTGAGTGAAGAGTCATACAAGGAGCACTTTGATCATGCAGCTTTTGAGAGACAACCTGACACTCTGGACCTCTGA 3810 0.4063 MVNLGRRRMRGERRRKLHLSKIYSFACGKQSLKEDHSQIGGRGYSRVVFCNEPESFEAGIRSYADNSVSSTKYNLATFLPKSLFEQFRRVANFFFLVTGILAFTKLAPYTAVSAILPLIIIIGATMIKEGIEDWRRKQQDIEVNSRRVKVHTGQGTFEYTEWKNLKVGHIVKIMKDEFFPADLLLLSSSYEDAFCYVETMNLDGETNLKLKQGLEVTSSLHEDFQFSDFQATIKCEDPNANLYSFVGSMEYKEQQYPLSPLQLLLRDSKLRNTDYIFGAVIFTGHDTKVIQNSTDAPSKRTKVEKKMDRVVYFMFCIVFLMAFVGSIFFGITTKDDLDNGLMKRWYLRPDDSTIFFDPKRAPAAAIFHFFTALMLYGFFIPISLYVSIEIVKVLQSIFINQDIHMYYEDADKPSYARTSNLNEELGQVDTILSDKTGTLTCNTMEFIKCSIAGVAYGRGVTEVERSLDSKNGSTLIDDTRDSPVRNVPIKGFNFTDERIMNGKWVNEPYANVIKNFFHLLAICHTALPEVDEDTGNVSYETESPDELAFVIAAREIGFKFYKRTQTSLSIYELNPVSGDKIERTYKLLNVLEFNSTRKRMSVIVKDEEGRILLLCKGADSVMFERLAKDGREFEEKTLEHVHEYSDAGLRTLILAYRELDENQYKEFDNNFSQAKNSVSEDRETLIEEVSEKIERNLILLGATAVEDKLQNGVPDCIDKLSQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIIQLESPEIQALEKAGDKVAIVKACRENIRHQISEAAQQITASRGTSQQAFALIIDGKSLAYALEDNMKKMFLDLATRCASVICCRSSPKQKALVTRLVKSATGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFCYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLSVYNIFFSSLPVIALGVFDQDVSARYCLRFPMLYQEGVQNLLFSWRRIFSWMLNGFISAIIIFFFCTKAMEIQAFDEKGRTAGRDILGATMYTCVVWVVNLQMAVAINYFTLIQHIFIWGSVAIWYLFLLAYGAMSPTISGNAYKVFVETLAPSPSFWFVTLVVVISALIPYFSYSAIQMRFFPMYHEMVQWVRYEGKTNDPEFVAMVRQGSLRPTTVGSTARLAAKDNDLKDIMELLTGSSQAESDVAYIHLVMEWCTQPNHHLDVKACHLAKQAFDEAIAELDTLSEESYKEHFDHAAFERQPDTLDL 1269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01818 1269 ProSitePatterns E1-E2 ATPases phosphorylation site. 434 440 IPR018303 -
Spst2g01818 1269 Pfam Phospholipid-translocating ATPase N-terminal 48 114 IPR032631 -
Spst2g01818 1269 FunFam Phospholipid-transporting ATPase 542 700 - -
Spst2g01818 1269 SFLD p-type atpase 415 916 IPR044492 -
Spst2g01818 1269 SUPERFAMILY Calcium ATPase, transmembrane domain M 60 1143 IPR023298 -
Spst2g01818 1269 SUPERFAMILY Calcium ATPase, transduction domain A 151 291 IPR008250 -
Spst2g01818 1269 FunFam Phospholipid-transporting ATPase 124 294 - -
Spst2g01818 1269 FunFam Phospholipid-transporting ATPase 700 905 - -
Spst2g01818 1269 NCBIfam phospholipid-translocating P-type ATPase 63 1150 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Spst2g01818 1269 NCBIfam HAD-IC family P-type ATPase 837 947 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst2g01818 1269 CDD P-type_ATPase_APLT_Dnf-like 65 1014 - -
Spst2g01818 1269 Gene3D - 563 699 IPR023299 GO:0000166
Spst2g01818 1269 PRINTS P-type cation-transporting ATPase superfamily signature 865 884 - -
Spst2g01818 1269 PRINTS P-type cation-transporting ATPase superfamily signature 432 446 - -
Spst2g01818 1269 Gene3D - 700 903 IPR023214 -
Spst2g01818 1269 Gene3D - 124 294 - -
Spst2g01818 1269 Coils Coil 1229 1249 - -
Spst2g01818 1269 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 439 702 IPR023299 GO:0000166
Spst2g01818 1269 SUPERFAMILY 14-3-3 protein 1226 1254 IPR036815 -
Spst2g01818 1269 SFLD C1.7: P-type atpase like 415 916 - -
Spst2g01818 1269 SUPERFAMILY HAD-like 420 909 IPR036412 -
Spst2g01818 1269 Gene3D - 1221 1256 IPR036815 -
Spst2g01818 1269 Pfam Cation transport ATPase (P-type) 533 626 - -
Spst2g01818 1269 Pfam Phospholipid-translocating P-type ATPase C-terminal 893 1143 IPR032630 -
Spst2g01818 1269 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 36 1155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01818 Spst-Chr2 17264022 17272779 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01818 17 1191 Primary Pumps ATPases AT1G68710 71.676 0.0 1853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01818 K01530 - gmx:100811892 2201.02