Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01815 ATGAGCCCTCTAATCAGGCTAGCCTTAACAATCAACTTCATTTCCACTTCCCATACCTTCACATCGCTCTTTAACCTCTTAACTTTCCCTCATACCCTTCTCAAATGGACATCACATTTCATTTTCCTCCACTTCTCCCATCCCTTATCATGCACCCTCTTTCGAGATAACTCCGCAACCTGCACCTCCATCTCACGGGAAGATTGCGCCGTCTGTCTCTGCAGAATGGAAGAAAGAGAAGAAGAGATTGTAACCCTGCGCTGTGAACATGCCTTTCACAGAGGTTGCTTCGACACTTGGGTTGCTTTCAACTCTGCCGCCACCACCACTTGCCCTCTCTGCAGAGATTCAGTGTCTCCAAAACGGAAGATTGTTGGAGAGTGTCAACCTCGTATTCTTCCATTTCATTCTTCTTGTTCTATCAACAATCATGAATCTGAGATAAAGTGGTTACGATGA 459 0.4553 MSPLIRLALTINFISTSHTFTSLFNLLTFPHTLLKWTSHFIFLHFSHPLSCTLFRDNSATCTSISREDCAVCLCRMEEREEEIVTLRCEHAFHRGCFDTWVAFNSAATTTCPLCRDSVSPKRKIVGECQPRILPFHSSCSINNHESEIKWLR 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01815 152 ProSiteProfiles Zinc finger RING-type profile. 69 115 IPR001841 -
Spst2g01815 152 PANTHER RING ZINC FINGER PROTEIN-RELATED 60 123 - -
Spst2g01815 152 SMART ring_2 69 114 IPR001841 -
Spst2g01815 152 Pfam Ring finger domain 68 115 IPR001841 -
Spst2g01815 152 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 124 IPR013083 -
Spst2g01815 152 SUPERFAMILY RING/U-box 63 123 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01815 68 129 C3H Transcription Factor Family AT5G05810 44.444 3.87e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01815 - K16282 sspl:121796559 87.4261