Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01814 ATGTTGATGAAATACTTGGCTCTGTTTTACTCTCATCTCAAATGGGTGTTGGATTTCCTTCTTTATTACCCTTTCTACAAGCTTCATGATTCTGATATGCCAATGATTGGAGAAACCCAAAGCATATGCCACTATGCACACGCCCCTGGCACAGAGGAAGATGATGTTGATTGTGCTGTTTGTCTGTGCGAAATTGGAGATGGTGAAGAGATTAGAGTGCTTGGGTGTGAACATTGCTTTCACAGAAACTGCTTGGATGCATGGATTGCTCTCAAAAATGTCACTTGCCCTCTCTGCAGAGAACCAGCGAGACCAAGAAGAAGCATCAATGAGGTTGGAGCTGAAGTTCTATGGTTTGAATTTTGCTCTGTCCACACTCATGAGGGTGATAGGTGGTGGCTCCGATGA 408 0.4412 MLMKYLALFYSHLKWVLDFLLYYPFYKLHDSDMPMIGETQSICHYAHAPGTEEDDVDCAVCLCEIGDGEEIRVLGCEHCFHRNCLDAWIALKNVTCPLCREPARPRRSINEVGAEVLWFEFCSVHTHEGDRWWLR 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01814 135 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 36 108 IPR013083 -
Spst2g01814 135 Pfam Ring finger domain 57 100 IPR001841 -
Spst2g01814 135 SMART ring_2 58 99 IPR001841 -
Spst2g01814 135 SMART ringv_2 57 100 IPR011016 GO:0008270
Spst2g01814 135 PANTHER RING ZINC FINGER PROTEIN-RELATED 41 108 - -
Spst2g01814 135 ProSiteProfiles Zinc finger RING-type profile. 58 100 IPR001841 -
Spst2g01814 135 SUPERFAMILY RING/U-box 40 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01814 Spst-Chr2 17199726 17200133 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01814 25 100 C3H Transcription Factor Family AT2G18650 41.772 3.24e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01814 K16282 - qsa:O6P43_025642 137.117