Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01809 ATGTCTGGAACATCCCCTCCGTTAGTACCTCCATCGTCACCGCCGCCATCTCCGGATGCACCGCCACCGGTGTCACCGAGCTCTCCACCGCCGCCACCACCATCAGCACCAGTTCCATCAAGAAGCCCTCCACCACCGCCACCACCATCAAACCCTCCTAACAACACATCTCCACCGCCATTATCACCACCTCAACCGTCACCATCAGCTCCACCACCTAACAACATTTCACCACCACCGCGAAATTCACCACCTCCTCCGGCCACCACGCCACCACCGGCCTCGCCAACACAAAATTCACCACCTCCTCCGGCTGCACCGGCCCCCAGAAACTCCACTAGGTCACCGCCACCAGCGGTCGATGCACCGCCACCGAGATCATCGCCGCCGCCAGCACCAGAACCATCCAACCCTCCTTCTAGGATTAGTCCTCCTCCCATACCAAGTTCCCCACCAGCTCCACCTTCAAATTCTACACCAAGCTCATTACCTCCATCACCACCATCAGTTACTCTATTGGCCCCACCACCGCCATCGCCGTCGCACATTTCATCGTCTCCGCCCCCGCTTCAGAATGGGACAGAAAATTCAACCTCTGGTGGAGGCGGAATTGGCACTGGTGGTTTAGTGGCTATTAGTGTGTTGGCTGGATTTCTGCTACTTGGCTTCATTGGTGTTCTTATGTGGTGCATGCGGAGGCAAAAGAGAAAGGTTCCTGTGAATGGTGGTTATGTCATGCCATCCACTCTTGCCTCATCTCCTGAATCAGATTCATCCTTTTTAAAGACACACTCATCAGCTCCTCTTGTACAAAGTGGCTCTGGCAGTGATGTTGTGTACACACCATCTGATCCTGGTGGACTAGGCCACTCAAGGTCATGGTTTTCATATGAAGAACTAATCAAGGCTACAAATGGTTTCTCAAGTCAAAGTCTTTTGGGTGAGGGTGGATTTGGTTGTGTGTATAAAGGACTTCTTCCAGATGGAAGAGAGATAGCAGTCAAACAACTGAAGATTGGTGGAGGTCAGGGCGAGAGAGAATTCAAAGCTGAGGTGGAAATTATCAGTCGTATACATCATCGCCATTTGGTTTCTTTAGTGGGATACTGCATTGAAGATAACAGAAGATTACTTGTCTATGACTATGTTCCTAACAATACCCTTTATTTTCATCTACATGGGGAAGGCCAGCCTGTGCTAGAATGGGCAAACCGTGTTAAAATTGCAGCTGGTGCAGCCCGAGGACTAGCTTATCTCCATGAAGACTGCAACCCTCGGATCATTCACAGGGATATCAAGTCGTCAAACATTCTTTTAGATTTCAATTGTGAAGCAAAGGTCTCAGATTTTGGGCTAGCCAAATTAGCTCTGGATGCAAATACGCATATTACCACACGAGTCATGGGAACTTTTGGGTATGTTGCCCCCGAATATGCTTCAAGTGGCAAATTGACTGAGAAGTCTGATGTATATTCTTTTGGAGTCGTGCTTTTGGAGCTAATTACTGGGCGAAAACCAGTGGATGTATCCCAACCCTTGGGAGATGAAAGCTTGGTTGAATGGGCTCGGCCTTTACTGAGTCATGCAATCGATAGTGAGGAATTGACTAGTTTGGCAGATCCAAGGCTAGAAAAGAATTATGTTGAGAGTGAATTGTATTGCATGATTGAGGTTGCTGCTGCTTGTGTGCGGCATTCAGCTTCAAAGAGACCTCGCATGGGACAGGTTGTTAGAGCTTTTGATAGCTTAGGAGGTACTGATCTAACCAATGGAATGAGACTTGGGGAAAGCGAAGTGTTTGACTCTGCACAGCAATCTGAAGAAATAAGATTATTTCGTAGGATGGCATTTGGTAGTCAAAATTATAGCACAGACTTCTTTAGCCATGCTAGTTTGAATCCATGA 1905 0.4829 MSGTSPPLVPPSSPPPSPDAPPPVSPSSPPPPPPSAPVPSRSPPPPPPPSNPPNNTSPPPLSPPQPSPSAPPPNNISPPPRNSPPPPATTPPPASPTQNSPPPPAAPAPRNSTRSPPPAVDAPPPRSSPPPAPEPSNPPSRISPPPIPSSPPAPPSNSTPSSLPPSPPSVTLLAPPPPSPSHISSSPPPLQNGTENSTSGGGGIGTGGLVAISVLAGFLLLGFIGVLMWCMRRQKRKVPVNGGYVMPSTLASSPESDSSFLKTHSSAPLVQSGSGSDVVYTPSDPGGLGHSRSWFSYEELIKATNGFSSQSLLGEGGFGCVYKGLLPDGREIAVKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIEDNRRLLVYDYVPNNTLYFHLHGEGQPVLEWANRVKIAAGAARGLAYLHEDCNPRIIHRDIKSSNILLDFNCEAKVSDFGLAKLALDANTHITTRVMGTFGYVAPEYASSGKLTEKSDVYSFGVVLLELITGRKPVDVSQPLGDESLVEWARPLLSHAIDSEELTSLADPRLEKNYVESELYCMIEVAAACVRHSASKRPRMGQVVRAFDSLGGTDLTNGMRLGESEVFDSAQQSEEIRLFRRMAFGSQNYSTDFFSHASLNP 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01809 634 MobiDBLite consensus disorder prediction 1 201 - -
Spst2g01809 634 FunFam Proline-rich receptor-like protein kinase PERK8 280 382 - -
Spst2g01809 634 MobiDBLite consensus disorder prediction 186 201 - -
Spst2g01809 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Spst2g01809 634 MobiDBLite consensus disorder prediction 7 185 - -
Spst2g01809 634 SUPERFAMILY Protein kinase-like (PK-like) 289 578 IPR011009 -
Spst2g01809 634 CDD STKc_IRAK 313 583 - -
Spst2g01809 634 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 220 615 IPR047117 -
Spst2g01809 634 FunFam proline-rich receptor-like protein kinase PERK8 383 594 - -
Spst2g01809 634 ProSitePatterns Protein kinases ATP-binding region signature. 313 335 IPR017441 GO:0005524
Spst2g01809 634 ProSiteProfiles Protein kinase domain profile. 307 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01809 634 SMART serkin_6 307 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01809 634 Gene3D Transferase(Phosphotransferase) domain 1 383 591 - -
Spst2g01809 634 Gene3D Phosphorylase Kinase; domain 1 287 382 - -
Spst2g01809 634 Pfam Protein tyrosine and serine/threonine kinase 310 579 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01809 Spst-Chr2 17143830 17148063 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01809 172 576 Trihelix Transcription Factor Family AT1G68690 69.268 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Spst2g01809 PK_Tyr_Ser-Thr 3.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01809 - - vun:114173712 832.402