Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01807 ATGTTTGAGAGGCTTGCCAAGGATGGGAGGGAGTTTGAAGAGAAAACCTTGGAACATGTGCATGAATATTCTGATGCAGGTCTAAGGACTCTAATTTTGGCATATCGTGAACTTGATGAAAACCAATACAAGGAGTTTGATAATAATTTTTCTCAAGCGAAAAATTCAGTTAGTGAAGATCGGGAAACACTGATTGAGGAAGTATCAGAAAAGATTGAGAGGAATTTAATCCTTCTTGGTGCCACTGCTGTAGAGGACAAGCTCCAAAACGGGGTTCCTGATTGCATTGACAAGCTTTCCCAAGCTGGAATTAAGATCTGGGTTTTGACTGGGGATAAAATGGAGACTGCCATCAATATTGGTCCAGAAATTCAAGCATTGGAGAAGGCTGGAGACAAGGTGGCCATTGTTAAGAGAGCTGATGCATGCATTGTATTGGTTTACATAGGTGATGATTTAAATTTATATTTCATGGATTCCTCCATTCTAGTTGAAGGGAAGGGATTGCTTGGTGTAGAAAATATCCGCCATCAAATATCTGAAGCTGCTCAGCAGATTACTGCCTCCAGAGGAACCTCTCAGCAAGCATTTGCTCTAATTATTGATGGAAAATCACTTGCTTATGCCCTAGAGGATATGAAGAAAATGTTTTTAGACCTTGCAACTCGTTGTGCATCTGTTATCTGCTGTCGTTCCTCACCAAAGCAGAAGGCACTGGTCACTAGACTGGTAAAATCAGCTACTGGTAAAACTACATTAGCTATTGGTGATGGAGCTAATGATGTGGGAATGCTTCAAGAAGCAGATATAAGGATTGGAATCAGTGGCGTTGAAGGAATGCAGGCGGTTATGTCTAGTGATATTGCAATTGCACAGTTCTATTATTTGGAAAGGTTACTTCTTGTACATGGACATTGGTGTTACCGAAGAATCTCATCAATGATATGCTACTTCTTCTACAAAAACATCACATTTGGCTTTACTCTATTCTTATATGAGGTGTATGCATCATTCTCTGGGAAACCTGCTGCATACAATGACTGGTTTTTGTCGGTCTATAATATCTTCTTTTCTTCACTTCCCGTGATTGCACTTGGGGTCTTTGACCAGGATGTGTCTGCTCGGATGCACATTGCCAACGAAGGCGTGCAAAATCTTCTCTTTAGCTGGCGTAGAATTTTCAGCTGGATGCTTAATGGCTTTATTAGTGCCATAATAATCTTCTTTTTCTGCACAAAGGCAATGGAGATTCAAGCCTTTGATGAGAAGGGAAGAACTGCTGGGAGGGATATACTCGGAGCAACAATGTATACTTGTGTGTTATGGAATTGCTTACTGGCTCCTCTCAAGCAGAAAGCGATGTTGCTTGGCTCTTCCTCCTCGAAGGTCTGCCATTTGGCTAAACAAGCTTTTGATGAGGTAATTGCAGAGTTGGACACCCTGAGTGAAGAGTCACACAAGGAGCACTTTGATCATGCAGCTTTTGAGAGACAACCTGGCACTCTGGACCTCTGA 1515 0.4172 MFERLAKDGREFEEKTLEHVHEYSDAGLRTLILAYRELDENQYKEFDNNFSQAKNSVSEDRETLIEEVSEKIERNLILLGATAVEDKLQNGVPDCIDKLSQAGIKIWVLTGDKMETAINIGPEIQALEKAGDKVAIVKRADACIVLVYIGDDLNLYFMDSSILVEGKGLLGVENIRHQISEAAQQITASRGTSQQAFALIIDGKSLAYALEDMKKMFLDLATRCASVICCRSSPKQKALVTRLVKSATGKTTLAIGDGANDVGMLQEADIRIGISGVEGMQAVMSSDIAIAQFYYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVYASFSGKPAAYNDWFLSVYNIFFSSLPVIALGVFDQDVSARMHIANEGVQNLLFSWRRIFSWMLNGFISAIIIFFFCTKAMEIQAFDEKGRTAGRDILGATMYTCVLWNCLLAPLKQKAMLLGSSSSKVCHLAKQAFDEVIAELDTLSEESHKEHFDHAAFERQPGTLDL 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01807 504 Gene3D - 454 491 IPR036815 -
Spst2g01807 504 Gene3D - 75 294 IPR023214 -
Spst2g01807 504 NCBIfam HAD-IC family P-type ATPase 227 338 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst2g01807 504 SUPERFAMILY HAD-like 72 303 IPR036412 -
Spst2g01807 504 Pfam Phospholipid-translocating P-type ATPase C-terminal 283 446 IPR032630 -
Spst2g01807 504 SUPERFAMILY Calcium ATPase, transmembrane domain M 304 423 IPR023298 -
Spst2g01807 504 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 445 - -
Spst2g01807 504 FunFam Phospholipid-transporting ATPase 79 295 - -
Spst2g01807 504 NCBIfam phospholipid-translocating P-type ATPase 1 447 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01807 Spst-Chr2 17085854 17090801 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01807 1 442 Primary Pumps ATPases AT3G25610 67.591 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01807 K01530 - gmx:100811892 714.531