Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01785 ATGTCAAATGGAAGTGTTGCTTCCCGTCTGAAAGCCAAGCCAGCTTTGGACTGGCCTACGAGAAAGAGAATAGCTTTAGGAGCGGGAAGAGGCTTGCTATATTTGCATGAACAGTGTGATCCAAAGATTATTCACCGGGATGTGAAGGCAGCAAATATCTTGCTTGATGATTTTTGTGAGGCTGTGGTGGGAGATTTTGGGCTGGCAAAGCTGTTAGATCACAGGGATTCACATGTGACAACAGCAGTGAGAGGCACTGTAGGGCACATAGCCCCCGAGTATCTCTCAACAGGTCAATCTTCTGAGAAAACCGATGTGTTTGGTTTTGGAATTCTTCTTCTTGAACTAATATCTGGCCAAAGGGCTCTTGAGTTTGGGAAAGCAGCAAACCAGAAAGGAGCCATGCTAGACTGGATGAGGAAGCCAAGTCCCAGAACTAGTAAGCATATGCAGCTTAAGCTTGAAGCAAACGCCAAGGCTACTTTGTGA 489 0.4622 MSNGSVASRLKAKPALDWPTRKRIALGAGRGLLYLHEQCDPKIIHRDVKAANILLDDFCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGQRALEFGKAANQKGAMLDWMRKPSPRTSKHMQLKLEANAKATL 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01785 162 ProSiteProfiles Protein kinase domain profile. 1 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01785 162 Pfam Protein kinase domain 1 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01785 162 Gene3D Transferase(Phosphotransferase) domain 1 1 160 - -
Spst2g01785 162 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 1 142 - -
Spst2g01785 162 FunFam Somatic embryogenesis receptor-like kinase 1 1 160 - -
Spst2g01785 162 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Spst2g01785 162 SUPERFAMILY Protein kinase-like (PK-like) 1 144 IPR011009 -
Spst2g01785 162 SMART serkin_6 1 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01785 Spst-Chr2 16864884 16866518 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01785 1 155 Receptor kinase-like Gene Family AT5G16000 83.871 6.28e-90 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Spst2g01785 Pkinase 2.1e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01785 - - gmx:100804283 281.182