Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01782 ATGGGGAAAGACAGTTCCGATTGTGATTCCCATCACAAACGTCTTGGTCTTTTAAAAGATCAAGTTCACTTGGTTAAAAGGAAAGACTGTGATCGCCATGAGATTGCTCCAATCCAAGACCAACTATCATTTGAGAAGGGTTTTTTCATAGTAATTCGTGCATGCCAATTGTTAGCCCAAAAGAATGATGGAATAGTATTGGTGGGGGTGGCAGGTCCTTCTGGGGCGGGCAAGACTGTATTTACCGAAAAGATACTCAACTTCATGCCCAGTATTGCCGTCATTTCAATGGATAATTACAACGATTCTAGTCGAATTGTTGATGGAAACTTTGATGATCCACGCTTAACAGACTACGACACATTACTCCAGAATTTAAATGATTTAAAGGAAGGAAAGCCTGTTCAAGTTCCCATATATGATTTCAAGTCCAGTTCACGAACAGGATACAGGACTGTAGAAGCCCCGACTTCTCAAATTGTGATTATAGAGGGCATCTATGCCTTGAGCGAAAAGTTGCGACCTCTACTTGACCTTCGAGTCTCTGTTACAGGAGGAGTTCACCTTGACCTTGTGAAGCGAGTTATTCGTGATATTCAACGTGCTGGTCAAGAACCAGAAGAAATCATTCATCAAATATCTGAGACGGTGTATCCAATGTACAAGGCCTTTATTGAGCCAGATCTCCAGACAGCACATATAAAAATCATCAACAAATTCAATCCATTTACTGGATTCCAGAGCCCGACTTACATATTAAAGTCAGCAAAAAATTTAGAAGTGGATCAAATTAAAGCTGTTCTCTCTGAGGATTTTATGGAAACAACCGAGCAAACTTATGACATATATCTTCTTCCCCCCGGTGAAGATCCAGAAACTTGCCAATCATATTTGCGGATGCGAAATAAGGATGGGAAATACAGTCTCATGTTTGAGGAATGGGTGACAGATAATCCATTTGTTATATCACCAAGAATTACTTTTGAGGTCAGTGTGCGCCTTCTAGGTGGACTAATGGCCTTGGGATACACAATAGCTACTATCCTTAAGAGAAACAGTCATGTTTTTTCTGATGATAGGGTTTGTGTGAAACTCGATTGGCTTGAGCAACTTAATAGACATTATGTTCAGGTACAAGGAAGAGATCGCTTAGTTTTAAAATACATAGGACAGCAGCTGGGTCTAGATGGTTCCTACATTCCTCGGACCTACATTGAGCAAATTCAAATTGAAAAGCTTGTGGATGAGGTTATGGCCCTACCAGATGATTTGAAGACAAAGCTCAGCCTAGATGAGGATTTGGTGTCAAGCCCCAAGGAAGCACTTTCTAGAGCCTCTGCTGATAGAGTTGCCATGAGAAATAAACATCTGAGGAGCGGAATGTCACAGTCATATACCAATCAAAGAGACAGAAACCTAGCCAAGGTTACTGGATATGATGCCAACAACAGAAGGTTTGGTGAAAGAAATTCAGAGTCCAGTGCAATGTCAGTTAATCAGGGAGCCATCAATCAGCTTTCAGACCAAATTTCTGCCCTCAATGATAGAATGGATGAGTTTACAAATCGTATCGAAGAGCTGAACTCCAAGTTAAACACCAGTAGAAATTCTCCAAGCCAACAAAATCTGTCACTTCAAGCTGAGACATGCAATGGATCTGCTCCCACCTCTTACTTCATAACTAGTTTGGGCAATGGTTCTCTAACTGGATCTAAAATGGCAAATTCCTCTTCGTCGTCACAGTTAACTAAGGATTTTCCTTTCATGGATGAGAAAGCCATATTCTTCCTCAAATCCACTGTTCTCCCCCCTTCTTCTGCTGATTTCTCACCTTCAGTATCAGAATTTTCCCCCTTGGCAGATGATGGCATCGAGGTTGTTGGAAAATATTGTCAAAAGTTTGCTGGGAAAGTCTGTCAGCTGAAGATGGAAGATGTTTATTTGCTTGCAATGGGTTTGATTCTTGATGGGAATATCATTGGCTTTATCAAATTTGGTGTTGACAGGAGGAAAGTACATGTGACGGCAATTTCAATGTTATGGTGGTTGTCAGAGGAGGATGGTTCAGATCATGTAGGCGCCTGGAGAAAAAGTGTTGGTGGTGGTCAAAGGAAGCACACAGCAGCTCAGCGTCAGATCATGCATCAATTGGACAATCTCAATAATCTTCTCAGGGGGAGCTCAGGGGAGAAGTCTCACCAAACAAGAAGCAGCCGGAGAAGCATAGATGATACTGCATCAGATTCCATGGGAACTCGTGTTATGGCAGTGGTGGCAGATGGCTTCTTCTTCGAAAGTTTGATTAGCATTGCTCGTGAACGCAGGTTGCAGTTGGCACAGAGGATCAATCTCACCATGGATTTCAATTGCACCGCCAAGGATCAAAAGAAAGGCGTAGATCAATCCATCTTACTATGCTGCAAGTTCTTCGTCTCAGAAGCCCGTAACGTGGCCACTCTGGACGCAATAGAACGCGCTGCGAGGTCAAACCCGGAGACCGTGATTGTGAACAAGTTTCACGATCGAGCGTACAACAGAACGAGATACACTCTTGTGTCGTATGTTCTGCACGACTGCACCGGAAGTGCCGTTTACAGCCCCTTGCACCAAACCGCCATAGCCATGGCTGAGGCTGCCTTCAACACCATCAACCTCGAATCCCACGACGGCGCTCACCCTCGCTTGGGCGTTGTTGATGACATCGTTTTCCACCCTCTCGCACGTGCGTCAATCGGTGAGGCAGCGTGGCTCGCCAAAGCTGTTTCGGCAGACATTGGCAACCGTTTCAGTGTGCCAGTGTTTCTGTACGCCGCGGCCCACCCAACGGGGAAAGCGCTGGACACCATAAGGCGAGAACTCGGGTACTACCGACCTAATTTCCAGGGCAGCCAATGGGCCGGGTGGGCCATGCCGGACACCCTCTCGCAGAGACCAGACGAGGGGCCCAACGTGGTTTCACGGGCCAAAGGTATCTCAATGATCGGGGCACGCCCTTGGGTGGCACTCTACAATGTGCCGATCCAGTGCACTGACGTGTCAGCCGCAAGAAGAATCGCACGGAAGGTGAGTGCTCGCGGTGGTGGGCTTCCCACAGTGCAAACGCTTGCCCTTGTCCATGGCGAGGACTATTCTGAGATAGCCTGCATGCTGCTGGAGCCCAACCAGATTGGAGCAGACAGGGTGCAGCACACGGTGGAGACGCTGGCAGCACTAGAAGGAATTGACGTGGAACAGGGTTACTTCACCGACTCTTCTCCCGAAATGATTGTGGAGGAATACATGAAACTGATTACTGCTAACAGATCGTGA 3309 0.4597 MGKDSSDCDSHHKRLGLLKDQVHLVKRKDCDRHEIAPIQDQLSFEKGFFIVIRACQLLAQKNDGIVLVGVAGPSGAGKTVFTEKILNFMPSIAVISMDNYNDSSRIVDGNFDDPRLTDYDTLLQNLNDLKEGKPVQVPIYDFKSSSRTGYRTVEAPTSQIVIIEGIYALSEKLRPLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFTGFQSPTYILKSAKNLEVDQIKAVLSEDFMETTEQTYDIYLLPPGEDPETCQSYLRMRNKDGKYSLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIATILKRNSHVFSDDRVCVKLDWLEQLNRHYVQVQGRDRLVLKYIGQQLGLDGSYIPRTYIEQIQIEKLVDEVMALPDDLKTKLSLDEDLVSSPKEALSRASADRVAMRNKHLRSGMSQSYTNQRDRNLAKVTGYDANNRRFGERNSESSAMSVNQGAINQLSDQISALNDRMDEFTNRIEELNSKLNTSRNSPSQQNLSLQAETCNGSAPTSYFITSLGNGSLTGSKMANSSSSSQLTKDFPFMDEKAIFFLKSTVLPPSSADFSPSVSEFSPLADDGIEVVGKYCQKFAGKVCQLKMEDVYLLAMGLILDGNIIGFIKFGVDRRKVHVTAISMLWWLSEEDGSDHVGAWRKSVGGGQRKHTAAQRQIMHQLDNLNNLLRGSSGEKSHQTRSSRRSIDDTASDSMGTRVMAVVADGFFFESLISIARERRLQLAQRINLTMDFNCTAKDQKKGVDQSILLCCKFFVSEARNVATLDAIERAARSNPETVIVNKFHDRAYNRTRYTLVSYVLHDCTGSAVYSPLHQTAIAMAEAAFNTINLESHDGAHPRLGVVDDIVFHPLARASIGEAAWLAKAVSADIGNRFSVPVFLYAAAHPTGKALDTIRRELGYYRPNFQGSQWAGWAMPDTLSQRPDEGPNVVSRAKGISMIGARPWVALYNVPIQCTDVSAARRIARKVSARGGGLPTVQTLALVHGEDYSEIACMLLEPNQIGADRVQHTVETLAALEGIDVEQGYFTDSSPEMIVEEYMKLITANRS 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01782 1102 MobiDBLite consensus disorder prediction 725 746 - -
Spst2g01782 1102 Gene3D - 1000 1101 IPR037070 GO:0005542|GO:0016740
Spst2g01782 1102 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
Spst2g01782 1102 Pfam Formiminotransferase domain, N-terminal subdomain 804 997 IPR012886 GO:0005542|GO:0016740
Spst2g01782 1102 SUPERFAMILY CYTH-like phosphatases 262 407 IPR033469 -
Spst2g01782 1102 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 236 IPR027417 -
Spst2g01782 1102 SUPERFAMILY Formiminotransferase domain of formiminotransferase-cyclodeaminase. 804 997 IPR022384 GO:0005542|GO:0016740
Spst2g01782 1102 Gene3D - 66 247 IPR027417 -
Spst2g01782 1102 PRINTS Uridine kinase signature 132 147 - -
Spst2g01782 1102 PRINTS Uridine kinase signature 65 82 - -
Spst2g01782 1102 PRINTS Uridine kinase signature 188 198 - -
Spst2g01782 1102 PRINTS Uridine kinase signature 224 237 - -
Spst2g01782 1102 Pfam CYTH domain 269 404 IPR023577 -
Spst2g01782 1102 SMART FTCD_2 1001 1093 IPR013802 GO:0005542|GO:0016740
Spst2g01782 1102 Coils Coil 503 537 - -
Spst2g01782 1102 CDD UMPK_like 67 239 - -
Spst2g01782 1102 Gene3D - 801 999 IPR037064 GO:0005542|GO:0016740
Spst2g01782 1102 SMART FTCD_N_2 803 998 IPR012886 GO:0005542|GO:0016740
Spst2g01782 1102 PANTHER FORMIMINOTRANSFERASE-CYCLODEAMINASE 803 1097 - -
Spst2g01782 1102 ProSiteProfiles CYTH domain profile. 248 410 IPR023577 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01782 Spst-Chr2 16840509 16855046 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01782 67 236 PRT Gene Family AT5G40870 28.729 1.49e-17 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01782 K00876 - gmx:100797542 1089.72