Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01756 ATGCAGAATTTCTCCGAGAAATTGGGTTGGAGAATGCAGAAAGGGGATGAAGGGTTGGTGCAAGATTTCTGCAATGAGATTGGAGTTTCAAGAGGGGTCTTCAAGGTGTGGATGCACAACAATAAGAACATATGCAGGAAGCGATCGTTGGAGCCTGGTGAAAAGATCAATGGCAATGGTTCGGATAGTCTTAATAACAATCGTTGCAACACAAACAGCACCACCGATGACACACACTGA 240 0.4458 MQNFSEKLGWRMQKGDEGLVQDFCNEIGVSRGVFKVWMHNNKNICRKRSLEPGEKINGNGSDSLNNNRCNTNSTTDDTH 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01756 79 MobiDBLite consensus disorder prediction 56 79 - -
Spst2g01756 79 MobiDBLite consensus disorder prediction 48 79 - -
Spst2g01756 79 Gene3D - 1 43 - -
Spst2g01756 79 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 1 43 - -
Spst2g01756 79 NCBIfam homeobox domain, ZF-HD class 1 43 IPR006455 -
Spst2g01756 79 SUPERFAMILY Homeodomain-like 1 47 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01756 Spst-Chr2 16472943 16473182 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01756 1 47 ZF-HD Transcription Factor Family AT1G75240 65.957 3.63e-16 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01756 - - gmx:100817446 135.576