Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01738 ATGGGAATGGTCTATGGAGACATGATGGGGTCTCTTTCTCTTGCCACTTTTTCCAATGGTTCTTCATCTCAAGAGAGTTATGGTCATAGTCATGGTCATGGTCATGGTGGTGCTTCTGGCGTGGAAAATGGGAGGAGCACAAGCTGGAGTTTTCCTTTCATGAGGGAATTCCTTTCCTCAAACTTTGAAGACAGTAGTGATCTTGGGGCTGGGGAGAGTAACAGTAATGAGAAAACAAACACTAATGGCAAGTTTAGTGAAGAAAGTAACCCTAATGAGAACCCTCTTAGTGGCAAAGAGGTAGATAGTGGACACTCCAAACTGTGTGCAAGAGGGCATTGGAGGCCCGCAGAAGATTCCAAGCTGAAGGAGCTTGTGGCTCTTTACGGCCCTCAGAATTGGAACCTCATAGCTGAAAAGCTGGAAGGAAGATCAGGGAAGAGTTGTAGGCTGCGGTGGTTCAACCAGTTAGATCCAAGGATCAACAGAAGAGCTTTCAGTGAAGAGGAGGAAGAGAGGCTAATGCAGGCACATAGAATTTATGGCAACAAATGGGCCATGATTGCAAGGCTTTTCCCTGGGAGAACAGATAATGCAGTGAAGAATCACTGGCATGTTATAATGGCCAGGAAGTACAGGGAGCAATCCAGTGCTTACAGGAGGAGGAGAATGAGCCAATCCGTTTACAGAAGGGTGGAGCAAAATCCAACCTTTATTTGCAGAAGGGATACCTCAACCACGGAACAAGAACCATCACCTTCGCATTGTCTCAATCTCCTCAACAATGGAGTAGGAGTCACCAATAACGAGTCTAGTTTCCCATCCTTCCATGGAGTAGGTGCTGGTGAGGTTGTTGAGTTTGGCTTAAACGGTTCTCCACGAAACATGACTGGTGGGAGAGAAACAATGTCAATCGCCCCACAAGTTGGATTGTGTGTTGAAGCTCAACAAGCACCATTTAATTTCTACTTAGGTGGTGGAAGCAATGACATGATGGGAGAGTCTAATAGCCAGATCAGATGCTGGGAAAGGACCAATGAATCTCTTCACCATCATTGGCAGCCATCTGGTCTATACCCTCATTATCCCCAACAATATTTGATGGCAATGCAACAGCTTGACAACAACACACGCAACAATTTTTACAGTTTCTTGAATTCCTCATCAGCATCAACAACCACAGGCAAGGAACCATCATCATCACCATGTGTTGCAGGAATCAGAGATAAAGTGGTGAATAGTGACCCCCCAGATGGTGTTCCACCCCCATTTTTTGACTTCCTTGGAGTAGGAGCCACATGA 1302 0.4578 MGMVYGDMMGSLSLATFSNGSSSQESYGHSHGHGHGGASGVENGRSTSWSFPFMREFLSSNFEDSSDLGAGESNSNEKTNTNGKFSEESNPNENPLSGKEVDSGHSKLCARGHWRPAEDSKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRRMSQSVYRRVEQNPTFICRRDTSTTEQEPSPSHCLNLLNNGVGVTNNESSFPSFHGVGAGEVVEFGLNGSPRNMTGGRETMSIAPQVGLCVEAQQAPFNFYLGGGSNDMMGESNSQIRCWERTNESLHHHWQPSGLYPHYPQQYLMAMQQLDNNTRNNFYSFLNSSSASTTTGKEPSSSPCVAGIRDKVVNSDPPDGVPPPFFDFLGVGAT 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01738 433 MobiDBLite consensus disorder prediction 64 104 - -
Spst2g01738 433 Gene3D - 111 162 - -
Spst2g01738 433 ProSiteProfiles Myb-like domain profile. 111 157 IPR001005 -
Spst2g01738 433 CDD SANT 165 205 IPR001005 -
Spst2g01738 433 MobiDBLite consensus disorder prediction 64 99 - -
Spst2g01738 433 PANTHER MYB PROTEIN-RELATED 111 253 - -
Spst2g01738 433 FunFam MYB transcription factor 164 234 - -
Spst2g01738 433 ProSiteProfiles Myb-like domain profile. 158 208 IPR001005 -
Spst2g01738 433 SUPERFAMILY Homeodomain-like 111 204 IPR009057 -
Spst2g01738 433 Gene3D - 164 235 - -
Spst2g01738 433 SMART sant 110 159 IPR001005 -
Spst2g01738 433 SMART sant 162 210 IPR001005 -
Spst2g01738 433 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 111 157 IPR017930 -
Spst2g01738 433 MobiDBLite consensus disorder prediction 18 43 - -
Spst2g01738 433 CDD SANT 114 155 IPR001005 -
Spst2g01738 433 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 158 212 IPR017930 -
Spst2g01738 433 FunFam MYB transcription factor 111 162 - -
Spst2g01738 433 Pfam Myb-like DNA-binding domain 111 157 IPR001005 -
Spst2g01738 433 Pfam Myb-like DNA-binding domain 163 206 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01738 Spst-Chr2 16349208 16351030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01738 56 236 MYB Transcription Factor Family AT1G69560 65.027 2.27e-77 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Spst2g01738 Myb_DNA-binding 1.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01738 K09422 - gmx:100776292 622.468