Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01726 ATGGAGGGCAGAACAAGGTCTGTGCTCCCACCTGGCTTCAGGTTTCACCCCACTGATGAGGAACTAATTGTGTACTACCTTTGTAACCAAGCCACATCAAAACCATGCCCTGCATCCATCATCCCAGAAGTGGATATCTATAAGTTTGATCCATGGGAGTTACCTGAAAAAACAGACTTTGGAGAAAATGAATGGTACTTCTTTAGTCCAAGAGAGAGGAAGTACCCAAATGGGGTGAGGCCTAATAGAGCAACTGTGTCTGGGTATTGGAAGGCCACTGGCACTGACAAAGCAATCTACAGTGGCTCTAAGCATATTGGTGTGAAGAAAGCTCTGGTTTTTTACAAGGGTAAGCCACCAAAGGGTCTCAAGACAGATTGGATTATGCATGAGTATAGATTAATTGGATCAAGAAGACAAGCCAATAGACAAATTGGATCCATGAGGCTAGATGACTGGGTCTTGTGTAGGATCTACAAGAAGAAGAACATGGGAAAATCATTGGAGGCAAAAGAGGACTATCCAATTGCACAAATCAATCTTACACCACCAAATAATGGCACTGAACAAGAAGTGGTGAAATTTCCAAGGACTAGTTCCCTTACTCATCTTTTGGATATGGATTACTTGGGACCAATATCCCACATACTATCTGATGCATCATACAATTCAACCTTTGATTTTCAACTAAACACTGCCAATGGTGGAATGGACCCGTTCGTAAAACAACAGCCACTTGAAATTCCTAATAACCTTTATTATGCAGCAGATTCAGGGAAGTACCAAGTGAAACAGAACAGCACCATCAACCCCACCATATTTGTGAACCAACTCTATGATCAGAGAGGATAA 852 0.4202 MEGRTRSVLPPGFRFHPTDEELIVYYLCNQATSKPCPASIIPEVDIYKFDPWELPEKTDFGENEWYFFSPRERKYPNGVRPNRATVSGYWKATGTDKAIYSGSKHIGVKKALVFYKGKPPKGLKTDWIMHEYRLIGSRRQANRQIGSMRLDDWVLCRIYKKKNMGKSLEAKEDYPIAQINLTPPNNGTEQEVVKFPRTSSLTHLLDMDYLGPISHILSDASYNSTFDFQLNTANGGMDPFVKQQPLEIPNNLYYAADSGKYQVKQNSTINPTIFVNQLYDQRG 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01726 283 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
Spst2g01726 283 FunFam NAC transcription factor 18 165 - -
Spst2g01726 283 PANTHER NAC TRANSCRIPTION FACTOR 56 9 179 - -
Spst2g01726 283 SUPERFAMILY NAC domain 5 161 IPR036093 GO:0003677|GO:0006355
Spst2g01726 283 ProSiteProfiles NAC domain profile. 9 161 IPR003441 GO:0003677|GO:0006355
Spst2g01726 283 Gene3D NAC domain 18 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01726 Spst-Chr2 16231728 16232900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01726 1 216 NAC Transcription Factor Family AT1G69490 68.421 1.27e-115 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Spst2g01726 NAM 2.4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01726 - - gmx:100170717 543.502