Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01723 ATGATGATGGAGAAAGAGAAAACACGATCTGCAATTGCTACAGATGTACCATCAGGGGAGGATACAGATCATCCTATCAGATGTGAGCTTTATGTTGAAGATATTGATTCCCATCAGTTGGTAGTATTTAGGAAGATGTTTGAAGGGCTACTATGTTACATAATGCCTCATCATGCTTGTTTGGTTAAGGTCATAGTTGAAAAAGTTCGAGATGATAGTGTTATTATATCTATCACAAGGACTGATTCCGGTTACCTTACAACTTTGTCATTAAAAATGGGAAGGATGCCATGCTGTGAGAAGGTAGGGTTGAAGAAAGGACCATGGACACCAGAAGAAGACAAGACGCTCCTCGCCTATGTTGAAAAGCATGGCCATGGAAACTGGCGTTCGGTGCCTGCCAAAGCGGGTCTTGAAAGATGTGGAAAGAGTTGCAGATTGAGGTGGATTAACTACCTCAAGCCTGATATAAAACGAGGAAACTTCAGCATGGAGGAAGATCACACCATAATTACTCTTCATGCTCTTCTCGGAAACAAGTGA 543 0.418 MMMEKEKTRSAIATDVPSGEDTDHPIRCELYVEDIDSHQLVVFRKMFEGLLCYIMPHHACLVKVIVEKVRDDSVIISITRTDSGYLTTLSLKMGRMPCCEKVGLKKGPWTPEEDKTLLAYVEKHGHGNWRSVPAKAGLERCGKSCRLRWINYLKPDIKRGNFSMEEDHTIITLHALLGNK 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01723 180 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 93 180 - -
Spst2g01723 180 SMART sant 105 155 IPR001005 -
Spst2g01723 180 MobiDBLite consensus disorder prediction 1 20 - -
Spst2g01723 180 Gene3D - 105 158 - -
Spst2g01723 180 SUPERFAMILY Homeodomain-like 107 180 IPR009057 -
Spst2g01723 180 FunFam MYB-related transcription factor 105 158 - -
Spst2g01723 180 CDD SANT 108 153 IPR001005 -
Spst2g01723 180 Pfam Myb-like DNA-binding domain 106 153 IPR001005 -
Spst2g01723 180 ProSiteProfiles Myb-like domain profile. 101 153 IPR001005 -
Spst2g01723 180 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 157 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01723 Spst-Chr2 16200950 16204368 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01723 93 180 MYB Transcription Factor Family AT5G15310 76.136 5.88e-50 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Spst2g01723 Myb_DNA-binding 2.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01723 K09422 - gmx:100790887 183.726