Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01722 ATGTTTCTCTATTGCACGCACAGATGGTCAATCATAGCAGCTCACCTGCCAAAGAGAACAGACAATGAGATCAAGAACCATTGGAACACCAACATCAAGAAAAGACTCATCAGAATGGGCTTAGACCCCATTACCCACAAACCAATTAAACCCAACACGTTTGAAACTTATGGTGGTGTTCATGACCAGTCCAAGGACACCATCAATATTTGCCACGTGGCTCAATGGGAGAGTGCTCGACTTGAAGCTGAATCCAGAGGATCTATGTTGCAGGTTGGATCTGGATCCTCACATCTCCCTAGGTTAATTTTAAGCAAAATTCCAACTCAAACTTGTCTTTCATCAGATTCACTGTCAACCGAACACAAGACAGTGTACAACATGTATGCCCTCGTGCTTGCTACAAATCATGATTTTCAGTCATCTATATCCACTCTGAGCATTCCCATGCTTCCTGAAGGTTCTAATATTCGACAAATCACGAACAGAGAAAGTTTACTTTCATATAAGGGTGATAACAACGTCATGGGAACTAGTAGCCAAATTCAAAAGGAAATGGAAGGTTTTGAATCAAACTTAAAAGATGATGACATTATGGTGGCTGTGGAAGCATTTAGAACAGCAAGGTCTGAGAGTATTCAAGAACTGTTTAATGAATCAACTTCCATAGAAGGTCTAATATAA 684 0.4035 MFLYCTHRWSIIAAHLPKRTDNEIKNHWNTNIKKRLIRMGLDPITHKPIKPNTFETYGGVHDQSKDTINICHVAQWESARLEAESRGSMLQVGSGSSHLPRLILSKIPTQTCLSSDSLSTEHKTVYNMYALVLATNHDFQSSISTLSIPMLPEGSNIRQITNRESLLSYKGDNNVMGTSSQIQKEMEGFESNLKDDDIMVAVEAFRTARSESIQELFNESTSIEGLI 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01722 227 SUPERFAMILY Homeodomain-like 5 40 IPR009057 -
Spst2g01722 227 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 36 IPR017930 -
Spst2g01722 227 ProSiteProfiles Myb-like domain profile. 1 32 IPR001005 -
Spst2g01722 227 PANTHER F14D16.11-RELATED 7 177 - -
Spst2g01722 227 Pfam Myb-like DNA-binding domain 8 30 IPR001005 -
Spst2g01722 227 CDD SANT 6 32 IPR001005 -
Spst2g01722 227 Gene3D - 3 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01722 Spst-Chr2 16200168 16200851 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01722 8 86 MYB Transcription Factor Family AT3G01140 63.291 1.44e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Spst2g01722 Myb_DNA-binding 1.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01722 K09422 - gmx:100790887 310.071