Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01714 ATGAGCAGCGGCAGCGGTGGATCGTCCGCCACGGGGGCCAAGGAGAAAGAGAAGGCTCGGGTGAGTCGAACGTCGCTGATTCTGTGGCACTCGCACCAAAACGACCACGCGGCGGTGCAGAAGCTTCTCGAGGAGGATCCATCTCTCGTGAAGGCTAGGGATTACGACAACCGCACGCCGCTGCACGTGGCTTCGCTCCACGGCTGGGTCAAGGTTGCTAGTTGCTTGATCGAATTCGGTGCTGACGTCAACGCTCAGGATCGTTGGAAAAACACTGTACTCTTGTTGTTTCGTTCTGGAAAGCCTCTCGCTGATGCAGAAGGAGCTAAAAGATTGGCGATGATTGAGCTTTTGAAGTTACATGGAGGCTTGTCTTATGGCCAAAATGGAAGTCATTCTGAACAGAGACCTGTTCCTCCCCCATTGCCTAACAAATGTGACTGGGAAGTTGACCCCAATGAACTGGACTTCTCAAATTCAGTTTGCATTGGAAAGGGATCTTTTGGGGAGATTTTAAAAGCCCATTGGCGTGGAACACCTGTTGCCGTCAAACGTATTCTTCCATCTCTATCAGACGATAGATTGGTGATGTCTTCAGGTTGCCTCAGATTGATCAATATGTTAAAACAAATACCTTACGATCTGTTTTCTGTCAAGGCTTACTTGAGGCTACAGGACTTCAGGCACGAGGTTAATTTACTTGTGAAGCTTCGGCACCCTAATGTTGTTCAATTTCTTGGAGCTGTTACAGACAGGAAGCCCCTTATGTTAATTACTGAGTATCTAAGAGGAGGCGATCTTCATAAGTACCTCAAGGACAAAGGTGGTCTTAGTCCATCAACAGCTATCAGCTTTGGCTTGGATATTGCTAGGTACGCCTTATATCTTTATGGGTGTGTCAATGCCTCTCAACCTACTTTGCAATTGTTTTGGACTGTGCTTATGACATTTTTTGGTGTTCTGGTTATGGATGCTTCAAGCTCAAGCTTGGTTGGGGGGTCTGATGTTTGCTTTGACTTAGAATATGACCCCAAAGGGATGGCCTATCTTCACAACGAACCAAATGTTATCATTCATCGAGACCTAAAGCCAAGGAATGTTCTTTTAGTCAATTCTAGTGCCGACCATTTAAAAGTTGGTGATTTTGGACTTAGTAAGCTTATTAAGGTCCAAAGTTCTCATGATGTATACAAGATGACGGGTGAAACTGGAAGTTACCGCTACATGGCTCCTGAAGTTTTAAAACACCGGAGATATGATAAGAAGGTTGATGTATTCTCCTTTGCAATGATTTTGTATGAGATGCTTGAAGGTGAACCACCTTTTTCAAATTATGAACCTTATGATGGAGCCAAATATGTGGCCGAAGGACACAGGCCTTCTTTTCGGGCAAAGAGTTATACCGCTGAACTGCGAGATTTAACAGAGCTGTGCTGGGCTTCTGAAATAAATTTAAGACCTTCTTTCTTAGAGATCCTTAAAAGGCTTGAAAGGATCAAGGAAAATTTGCCTTCAGATCATCACTGGAGGAGCAGCTTGTTCGCTTCATGA 1551 0.4487 MSSGSGGSSATGAKEKEKARVSRTSLILWHSHQNDHAAVQKLLEEDPSLVKARDYDNRTPLHVASLHGWVKVASCLIEFGADVNAQDRWKNTVLLLFRSGKPLADAEGAKRLAMIELLKLHGGLSYGQNGSHSEQRPVPPPLPNKCDWEVDPNELDFSNSVCIGKGSFGEILKAHWRGTPVAVKRILPSLSDDRLVMSSGCLRLINMLKQIPYDLFSVKAYLRLQDFRHEVNLLVKLRHPNVVQFLGAVTDRKPLMLITEYLRGGDLHKYLKDKGGLSPSTAISFGLDIARYALYLYGCVNASQPTLQLFWTVLMTFFGVLVMDASSSSLVGGSDVCFDLEYDPKGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQSSHDVYKMTGETGSYRYMAPEVLKHRRYDKKVDVFSFAMILYEMLEGEPPFSNYEPYDGAKYVAEGHRPSFRAKSYTAELRDLTELCWASEINLRPSFLEILKRLERIKENLPSDHHWRSSLFAS 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01714 516 ProSiteProfiles Ankyrin repeat region circular profile. 56 88 - -
Spst2g01714 516 Pfam Ankyrin repeats (many copies) 57 94 IPR002110 GO:0005515
Spst2g01714 516 SUPERFAMILY Protein kinase-like (PK-like) 345 508 IPR011009 -
Spst2g01714 516 FunFam Integrin-linked protein kinase family 327 512 - -
Spst2g01714 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 357 369 IPR008271 GO:0004672|GO:0006468
Spst2g01714 516 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 85 501 - -
Spst2g01714 516 SUPERFAMILY Ankyrin repeat 28 96 IPR036770 -
Spst2g01714 516 ProSitePatterns Protein kinases ATP-binding region signature. 163 184 IPR017441 GO:0005524
Spst2g01714 516 Gene3D Transferase(Phosphotransferase) domain 1 264 512 - -
Spst2g01714 516 ProSiteProfiles Ankyrin repeat profile. 56 88 IPR002110 GO:0005515
Spst2g01714 516 CDD STKc_MAP3K-like 163 496 - -
Spst2g01714 516 FunFam serine/threonine-protein kinase STY46-like 211 263 - -
Spst2g01714 516 FunFam serine/threonine-protein kinase STY46-like 150 210 - -
Spst2g01714 516 SMART ANK_2a 56 85 IPR002110 GO:0005515
Spst2g01714 516 SUPERFAMILY Protein kinase-like (PK-like) 162 428 IPR011009 -
Spst2g01714 516 Pfam Protein tyrosine and serine/threonine kinase 224 496 IPR001245 GO:0004672|GO:0006468
Spst2g01714 516 Gene3D Phosphorylase Kinase; domain 1 141 263 - -
Spst2g01714 516 ProSiteProfiles Protein kinase domain profile. 157 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01714 516 Gene3D - 5 129 IPR036770 -
Spst2g01714 516 SMART serkin_6 157 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01714 516 PIRSF ILK 207 309 - -
Spst2g01714 516 PIRSF ILK 2 199 - -
Spst2g01714 516 PIRSF ILK 325 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01714 Spst-Chr2 16101334 16111283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01714 2 516 MAP Kinase Kinase Kinase AT1G14000 62.595 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Spst2g01714 PK_Tyr_Ser-Thr 7.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01714 - - gmx:100789273 679.478