Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01703 ATGGCGGGCGGAGGAAGTGCGAACCGGCCGCCTTGGAAGGAGCCAGCGGCGCCGCGACCCACCATCAGTCTCCCTCCAAGGGCTGCTTCCATGGAGACCCTTTTCAATGGCGGCTTCAGCCCTGGTCCCATGACTCTTCTCTCTGGCTTTTTGAATGATGGGGATGACTGCAACAAGTCCTTCTCTCAGCTCCTCGCCGGAGCCATGGCTTCTCCGGTGGCCGGCGCTGCCGCCGTTCACGACTCACCTGGCCCCTTTTCACCTTCTCGGAAGCATTTGATTAGATTCATGGAATATATTCCCATGAATGTAGCGTTATTGAATGTTAATACAGATAAATATAAGTTGGAAACTATAACATATACCATGCTTGATATCGTTACTTCTAGTACTGAATTAAAACAAAATGATAGTAAATTAGTGGATATGTCTGAATTATTTTCTGGACATGTTCGAACATGTCAATCACATCTTAGGCCAATTTTCCACCCATCTATTAAAGAGTCTCTAAGTTCCCAACGTGATGTGTCTTTTGGAATGACACACCAGCAGGCCCTAGCACAAGTCTCATCTCAGGCTTCACAAACTAATTCAAACATGCATCTCCAGACTGAATATTCATTATCAACACCAACCTCATTTACACAGGTTCCTGGGTCTACTTCAAATACTGCACAACAGCTGATTCCACCTTTAACTGTAGACTCTTGGGCCACAATGACCGAATCCGCTGATCATTCTCACTCTGAACAAAAATTGCAATCTTCATCATTGAATGTGGATAAGCCTGCAGATGATGGTTACAACTGGAGGAAGTATGGACAGAAACAGGTGAAGGGTAGTGAATTTCCTCGAAGTTATTACAAATGCACGCATACACACTGTCCTGTAAAGAAAAAGGTTGAGCGCTCACTTGAGGGTCATGTAACCGCAATTATTTATAAAGGAGAACACAACCATCAACGTCCTCATTCTAAGCGCATGAAAGACACTATGACTTCAAATGAAATTTCAAATATGCAAGGGAATGTTTCAGCTGGGACCACTAAGATGGATCCAGAGTCAAGTCAAGCAACAGCTGATCATCTATCAGGAAGTGACAGTGAGGAAGTAGGTGATCATGAAGCTGAAGTGGATGAGAAAAATGTTGAGCCTGACCCCAAGAGGAGTAAAACAGAAGTCTCGAATTCAGATCCAGCATCTTCACATAAGACCGTTACTGAGCCTAGAATCATAGTCCAAACAACAAGTGAAGTTGATCTTTTAGATGATGGTTACAGATGGCGAAAATATGGGCAAAAAGTTGTCAAAGGCAACCCTTATCCTAGGAGTTATTACAAATGTACAACGCCGGGTTGTAATGTTCGAAAGCACGTGGAGAGGGCTTCAACAGATCCTAAAGCTGTCATAACAACATATGAAGGAAAACACAATCATGATGTTCCAGCAGCTAAGACCAACAGCCACACTATGGCCAGCAACACTGCATCACATATAAAATCGCAGAATTCCAATCCTGGGAGGCATAGTTTTGGCAACAGAGATATTAGTGGCAATGATCAACAGCCGGTTGCACGGCTACGGTTGAAGGAAGAGCAGATAACCTAG 1608 0.4409 MAGGGSANRPPWKEPAAPRPTISLPPRAASMETLFNGGFSPGPMTLLSGFLNDGDDCNKSFSQLLAGAMASPVAGAAAVHDSPGPFSPSRKHLIRFMEYIPMNVALLNVNTDKYKLETITYTMLDIVTSSTELKQNDSKLVDMSELFSGHVRTCQSHLRPIFHPSIKESLSSQRDVSFGMTHQQALAQVSSQASQTNSNMHLQTEYSLSTPTSFTQVPGSTSNTAQQLIPPLTVDSWATMTESADHSHSEQKLQSSSLNVDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTHTHCPVKKKVERSLEGHVTAIIYKGEHNHQRPHSKRMKDTMTSNEISNMQGNVSAGTTKMDPESSQATADHLSGSDSEEVGDHEAEVDEKNVEPDPKRSKTEVSNSDPASSHKTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTNSHTMASNTASHIKSQNSNPGRHSFGNRDISGNDQQPVARLRLKEEQIT 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01703 535 Gene3D WRKY domain 407 483 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst2g01703 535 Gene3D WRKY domain 248 324 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst2g01703 535 SUPERFAMILY WRKY DNA-binding domain 414 482 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst2g01703 535 ProSiteProfiles WRKY domain profile. 265 323 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst2g01703 535 MobiDBLite consensus disorder prediction 394 409 - -
Spst2g01703 535 FunFam WRKY transcription factor 33 409 475 - -
Spst2g01703 535 MobiDBLite consensus disorder prediction 241 262 - -
Spst2g01703 535 Pfam WRKY DNA -binding domain 265 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst2g01703 535 Pfam WRKY DNA -binding domain 423 479 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst2g01703 535 SMART WRKY_cls 264 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst2g01703 535 SMART WRKY_cls 422 481 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst2g01703 535 MobiDBLite consensus disorder prediction 241 265 - -
Spst2g01703 535 MobiDBLite consensus disorder prediction 366 393 - -
Spst2g01703 535 FunFam WRKY transcription factor 249 324 - -
Spst2g01703 535 MobiDBLite consensus disorder prediction 338 409 - -
Spst2g01703 535 SUPERFAMILY WRKY DNA-binding domain 262 323 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst2g01703 535 MobiDBLite consensus disorder prediction 489 535 - -
Spst2g01703 535 MobiDBLite consensus disorder prediction 1 23 - -
Spst2g01703 535 ProSiteProfiles WRKY domain profile. 417 482 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst2g01703 535 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 179 504 IPR044810 GO:0003700
Spst2g01703 535 MobiDBLite consensus disorder prediction 489 520 - -
Spst2g01703 535 MobiDBLite consensus disorder prediction 338 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01703 Spst-Chr2 15975540 15979804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01703 19 65 WRKY Transcription Factor Family AT2G03340 63.265 5.43e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst2g01703 WRKY 1.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01703 - - gmx:100127369 610.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02930 3 78931215 78933019 Spst2g01703 2 15975540 15979804 PCT