Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01678 ATGGAAGACAAGGACGGAGCAGCCTCCGATCCCGCCGCGGTTGATTTCGCCGGCGACACGAGTTGGACATTCTCCGCCGATGGCTCCGACGGCGCGTACCTGCTATCCGGCGACAGGGAGCGAAGCATACTCAGGGAATTCGGGTGGAATCTTGAATCGGACCAGCCGAACCGGATCGGCACCGACGATGGATTGTGGATGCCGGTTCAGTCCTCTTTGACCAGTTCGACCGAACCGGCCGCTGCGGTGTCGTCGCGGTCGAATAACCAGTCGGTGTCGTCGAGCTCCAGCGAGGATCCGCCGGAGAAATCCACCGTCTCCGACGAGAAACCGGCTGAGATACCGAGTAAAGGTAAAAAGAAGGGGCAAAAACGAATACGGCAGCCACGGTTTGCATTTATGACCAAGAGTGAAGTTGATCATCTTGAGGATGGCTACAGATGGCGGAAGTATGGTCAGAAGGCAGTTAAAAATAGCCCATTCCCTAGGAGCTACTACCGCTGCACAAACAGCAAATGCACGGTGAAGAAGAGGGTTGAACGTTCTTCCGAGGACCCAACAATTGTGATTACCACATATGAAGGCCAACACTGTCATCATACCGTTGGATTTCCTCGAGGGGGAATCATTAGTCATGAGGCTACTGCCTTTGCGGGCCAGTTGGCTCCTACAATGTCACAGTTTTATTATCCAATTCATTCACCCAGAGAGAATAATAATATTAATACTCTCAGCTCCATTTCTCAACCATGCCAAGCACAGGATGATGCATCTAGAGGATCCAGCGTTGTAATGCCAGCTGATGCATCCTCTGTCCAGCCTCCCACGGATGAAGGGTTGCTTGGAGATATTGTACCTCCGGGAATGCGCATCAGATGA 879 0.5245 MEDKDGAASDPAAVDFAGDTSWTFSADGSDGAYLLSGDRERSILREFGWNLESDQPNRIGTDDGLWMPVQSSLTSSTEPAAAVSSRSNNQSVSSSSSEDPPEKSTVSDEKPAEIPSKGKKKGQKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTIVITTYEGQHCHHTVGFPRGGIISHEATAFAGQLAPTMSQFYYPIHSPRENNNINTLSSISQPCQAQDDASRGSSVVMPADASSVQPPTDEGLLGDIVPPGMRIR 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01678 292 MobiDBLite consensus disorder prediction 247 269 - -
Spst2g01678 292 MobiDBLite consensus disorder prediction 102 119 - -
Spst2g01678 292 ProSiteProfiles WRKY domain profile. 137 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst2g01678 292 SMART WRKY_cls 142 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst2g01678 292 MobiDBLite consensus disorder prediction 67 101 - -
Spst2g01678 292 MobiDBLite consensus disorder prediction 1 21 - -
Spst2g01678 292 MobiDBLite consensus disorder prediction 247 292 - -
Spst2g01678 292 FunFam WRKY transcription factor 57 128 202 - -
Spst2g01678 292 Gene3D WRKY domain 129 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst2g01678 292 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 53 239 IPR044810 GO:0003700
Spst2g01678 292 SUPERFAMILY WRKY DNA-binding domain 134 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst2g01678 292 MobiDBLite consensus disorder prediction 52 130 - -
Spst2g01678 292 Pfam WRKY DNA -binding domain 143 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01678 Spst-Chr2 15737313 15740686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01678 9 290 WRKY Transcription Factor Family AT1G69310 50.482 2.19e-79 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst2g01678 WRKY 1.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01678 - - gmx:100170676 483.411