Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst2g01677 | ATGGAGGAGAGGAAGTTTGTGTGCAAGTATTGCAGCAAGAGGTTCCCTTGTGGGAAGTCTCTTGGTGGCCACATCAGGACTCACATGATGAGTGAGAATTCAGCTTTAGGTAATGTAGAGAGGAAGAATGCTACTAATGCTATGTTAAAGTTGGATGGTGGGAGAAAGAGGAAGAGGGATTTGGGATCTGAAGAAAATGGTGGTGGTGTTAGTGGGGGGAACTACAACATCATTTATGGTCTTAGAGAGAACCCCAAGAAGACCACCAGGTTTGTGCATTCCAATTCCACTTTGCAAGTTGACAAGTTCTGCAAAGAATGTGGGAAGGGATTTCTATCAATGAAGGCTCTTTGTGGTCACATGGCTTGTCACTCTGAAAAGGACAAGGGAGCCAACAGGTTAGAAAGCAGTTCTGGTGGGTTTACTGAGAAGCAGAAATTGGTTATGGATAGTCAATCTGACACTGAAACATCTACGCCAAGGAGGTCCAAGAGAATGAGGTTCAAGACCCTTAGCAATAGCAACAACCAACCTCAATCGTCTGTTTCGGAGGTTGAGCAAGAACAAGAAGAAGTGGCTAGGTGTTTGATGTTGTTGTCTAAGGATTACAGGGGTCGTTTTGCTTTGTTCACAGAGTCTTCTGATAACAACTCGGTTATTCTAGAGGCAAAGTCACCTTCTCTGGAAACCAAGGTTACTATAATGAATAGTAATGGTAAGAATTTTATGTCTAGTGCTTATGTGGAGAAGAAGTTGGGGCAGCCCAAGGACTTGTATGATTCTGATAATTCAGATTCTGGGTATTTTAGATATGGTCCTAAGGAGGTTGATTCCACTGATTCAAATAATGGGCATTTCAAGAATGAGGTTAAGCCTTCCAAAGTCGGGTACTTGTCTAAATTTGAGGATTATGATGTTGAGTCGAGGAAAGTGCTAAGCAGGGAAGGAAGCAAGAACATTGAATTTAAGAAATTTGTTTCAGAGGATTGGGAGAATGATAGACAGAATGGTGGGGCTGCAAGAAAATTTGATTCAAAGAAATTTAAGAAGTCCAACTATGATTCTCTTGGCCAAAATTTGGGTGGTGTTTCTGGCAGGAAGATGAGGAATGATTTTGTCAATGATAAGATGAACAGGTACGAGTGCTTAACTAGTGAAAGAGACCATGGTTATGATGATTATGCTTATGAAAGTGATGGAAACAGCACACACTCTGATTCATATCCAGCTCCAAAGGCTTATAGAAAAAGGAATCTCAGTGGCAAAAAGGGGAAGAAGAAATCGAAATCAAGGAAAAGCAAGGTACATGAGTGTCCAATCTGCAACAAAATTTTCAGGTCAGGCCAAGCCTTGGGGGGTCATAAGAGATCCCATTTTATTGGAGGTTCTGAAGAGAACACCCTGGTGATAAGACCAGGTGCTCCTGTTGTTCCTTGTCTCATTGATCTCAACCTACCAGCACCAGATGATGAATAG | 1476 | 0.4187 | MEERKFVCKYCSKRFPCGKSLGGHIRTHMMSENSALGNVERKNATNAMLKLDGGRKRKRDLGSEENGGGVSGGNYNIIYGLRENPKKTTRFVHSNSTLQVDKFCKECGKGFLSMKALCGHMACHSEKDKGANRLESSSGGFTEKQKLVMDSQSDTETSTPRRSKRMRFKTLSNSNNQPQSSVSEVEQEQEEVARCLMLLSKDYRGRFALFTESSDNNSVILEAKSPSLETKVTIMNSNGKNFMSSAYVEKKLGQPKDLYDSDNSDSGYFRYGPKEVDSTDSNNGHFKNEVKPSKVGYLSKFEDYDVESRKVLSREGSKNIEFKKFVSEDWENDRQNGGAARKFDSKKFKKSNYDSLGQNLGGVSGRKMRNDFVNDKMNRYECLTSERDHGYDDYAYESDGNSTHSDSYPAPKAYRKRNLSGKKGKKKSKSRKSKVHECPICNKIFRSGQALGGHKRSHFIGGSEENTLVIRPGAPVVPCLIDLNLPAPDDE | 491 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst2g01677 | 491 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 8 | 28 | IPR013087 | - | |
Spst2g01677 | 491 | Pfam | C2H2-type zinc finger | 6 | 29 | - | - | |
Spst2g01677 | 491 | Pfam | C2H2-type zinc finger | 435 | 458 | - | - | |
Spst2g01677 | 491 | Pfam | C2H2-type zinc finger | 104 | 126 | - | - | |
Spst2g01677 | 491 | SUPERFAMILY | beta-beta-alpha zinc fingers | 103 | 458 | IPR036236 | - | |
Spst2g01677 | 491 | MobiDBLite | consensus disorder prediction | 416 | 433 | - | - | |
Spst2g01677 | 491 | MobiDBLite | consensus disorder prediction | 169 | 186 | - | - | |
Spst2g01677 | 491 | PANTHER | C2H2-LIKE ZINC FINGER PROTEIN | 1 | 491 | - | - | |
Spst2g01677 | 491 | MobiDBLite | consensus disorder prediction | 128 | 186 | - | - | |
Spst2g01677 | 491 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 438 | 458 | IPR013087 | - | |
Spst2g01677 | 491 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 6 | 33 | IPR013087 | - | |
Spst2g01677 | 491 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 102 | 129 | IPR013087 | - | |
Spst2g01677 | 491 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 436 | 458 | IPR013087 | - | |
Spst2g01677 | 491 | SMART | c2h2final6 | 436 | 458 | IPR013087 | - | |
Spst2g01677 | 491 | SMART | c2h2final6 | 6 | 28 | IPR013087 | - | |
Spst2g01677 | 491 | SMART | c2h2final6 | 102 | 124 | IPR013087 | - | |
Spst2g01677 | 491 | SUPERFAMILY | beta-beta-alpha zinc fingers | 2 | 30 | IPR036236 | - | |
Spst2g01677 | 491 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 104 | 124 | IPR013087 | - | |
Spst2g01677 | 491 | MobiDBLite | consensus disorder prediction | 394 | 435 | - | - | |
Spst2g01677 | 491 | MobiDBLite | consensus disorder prediction | 135 | 156 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst2g01677 | Spst-Chr2 | 15726021 | 15727496 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst2g01677 | 1 | 491 | C2H2 Transcription Factor Family | AT1G26610 | 39.024 | 1.82e-84 | 266 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Spst2g01677 | zf-C2H2_6 | 5.9e-11 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst2g01677 | - | - | gmx:100805520 | 619.772 |