Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01670 ATGTTTTTTTCTGTCTCCATTGGTTCTTCTGCGGCATTGCCTTTGCCACTCAGATGCACCGTCAAACTCTCTTCTGCCCGGGTTGTTGCTGCTGATGCCTTCCCTTCCTTTCTCCCCAGAGAAGTGCACACCATTCAAGACCCTTCTGCCAGAAAATTCGCCATGCGGATTCAGAGGCTACCCGTACCTGTTAGGTTCTCAGAAAATCCCATCATGAGTAGTTGTGTGAAGCCAATGGTGCAGAGCAATGAAAGTCCAGTTGTTCTTCTACATGGTTTTGACAGCTCTTGTTTAGAATGGAGATATGTTTTACCATTGCTTGAGGAATCTGGTATTGAAACCTGGGCCATTGACATTCTTGGTTGGGGTTTCTCTAATTTAGAAAGACTTCCTCCCTGTGATGTGGTGTCAAAGCGTAATCACTTCTACCAGTTTTGGAAGTCCTACATCAGAAGGCCAATGACATTAGTTGGACCAAGCCTTGGCTCTGCTGTTGCCATTGACTTTGCGGTCAATTATCCTGAAGCTGTGGAGAAGCTTGTTCTGATTGGTGCTAGTGTATATGCAGAGGGAACTGGAAAGCTGGCAACCTTACCCAGAGCAGTAGCCTATGCTGGGGTTAATTTGTTGAAGAGCTTTCCATTACGCATATATGCCACCTATTTGACCTTCACAAACATTTCCTTCAGCACTAGCCTTGATTGGACTAATGTGGGACGCTTGCATTGTTTATTGCCTTGGTGGGATGATGCTACTGTGGATTTTATGACAAGTGGTGGTTACAATGTTGCTCCTTTGATAGGAAAGGTAAAACAGAAGACACTGATAATATGGGGTGAAAATGACCGCATCATCAGCAATAAGTTTGCAGTGCAACTCCACTGTGAATTACCTGATGCAGCTATACGCCAAATACCCCATTGTGGGCATCTTCCTCATCTGGAAAGACCAGATTCTACCATGAAACTTATAGTTGAATTTGTGCAAAGAGAAGCTAAGCAGTTGAGTCCATGTGTTGTATGA 1023 0.4438 MFFSVSIGSSAALPLPLRCTVKLSSARVVAADAFPSFLPREVHTIQDPSARKFAMRIQRLPVPVRFSENPIMSSCVKPMVQSNESPVVLLHGFDSSCLEWRYVLPLLEESGIETWAIDILGWGFSNLERLPPCDVVSKRNHFYQFWKSYIRRPMTLVGPSLGSAVAIDFAVNYPEAVEKLVLIGASVYAEGTGKLATLPRAVAYAGVNLLKSFPLRIYATYLTFTNISFSTSLDWTNVGRLHCLLPWWDDATVDFMTSGGYNVAPLIGKVKQKTLIIWGENDRIISNKFAVQLHCELPDAAIRQIPHCGHLPHLERPDSTMKLIVEFVQREAKQLSPCVV 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01670 340 Gene3D alpha/beta hydrolase 77 335 IPR029058 -
Spst2g01670 340 Pfam Alpha/beta hydrolase family 87 319 IPR000073 -
Spst2g01670 340 PRINTS Epoxide hydrolase signature 305 327 IPR000639 GO:0003824
Spst2g01670 340 PRINTS Epoxide hydrolase signature 111 126 IPR000639 GO:0003824
Spst2g01670 340 PRINTS Epoxide hydrolase signature 170 183 IPR000639 GO:0003824
Spst2g01670 340 PRINTS Epoxide hydrolase signature 91 109 IPR000639 GO:0003824
Spst2g01670 340 SUPERFAMILY alpha/beta-Hydrolases 85 329 IPR029058 -
Spst2g01670 340 PANTHER HYDROLASE 15 331 - -
Spst2g01670 340 PRINTS Alpha/beta hydrolase fold signature 170 183 IPR000073 -
Spst2g01670 340 PRINTS Alpha/beta hydrolase fold signature 156 169 IPR000073 -
Spst2g01670 340 PRINTS Alpha/beta hydrolase fold signature 274 288 IPR000073 -
Spst2g01670 340 PRINTS Alpha/beta hydrolase fold signature 111 126 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01670 Spst-Chr2 15662454 15667858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01670 86 328 Acyl Lipid Metabolism Gene Families AT3G10840 23.248 1.66e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01670 - - gmx:100792060 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01670 2 15662454 15667858 Spst2g01670 2 15662454 15667858 ECH
Spst3g02340 3 67052804 67058805 Spst2g01670 2 15662454 15667858 PCT