Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01664 ATGACTAAAAGGGTTGTGTCCTTTCTTCTTCCCTACAGAGCCTTGTCCTCCTCCACTCCTGAAACCCCCAGCCTTTACTCCTTCCTCCAGCCCTCAGTCTTTTCCATCACCAGAAACAAGCAGCAACCCATTTCAGAAACCCCCCCAAAGCCCCCATCTTGCCTCTCCCCTTCTCAGCTCTCCACTCTCCAAACCAACCTCCACAAGTCCCTACTAAGCAGCAACACTGATGAGGCATGGAAGTCCTTCAAGGCCCTCACCACCCACCAAGCCTTCCCTCCCAAACCCCTTACCAATTCCCTCCTCTCCCACCTCTCCTCCCTTGGTGACACCCTCAACCTCAAGAGGGCCTTTGCCTCTGCTCTCTTCCTCATGGAAAAGAACCCCTTGCTGCTCCACCATGACACCCTTCACCACATGCTCCTGTGCATGAGGGATGCCAACACTGCTGCCCCTCCCTTTGCCCTTGTCAAGTCCATGCTCAGGAACAGGTTCTTTGTTCCCTTTCATGTCTGGGGTCCTGTGCTTGTTGAGATCAGTAGGAACTGTGGTAATGTTGCTGCTTTCTTGAGGCTCTTTGAGGAGAATTGTAGGGTGGCTCTTGAGGAGAAGATTGAGTTCATGAAACCTGATGTTGGCGCTTGCAATGCAGCACTGGAAGGTTGCTGTTGTGAACTTGAATCTGTAAGTGATGCTGAGAGGATTGTGGGGACAATGTCAAGTTTAGGGGTTAGGCCTGATGAGTTCAGTTTTGGGTTTCTAGGGTATATGTATGCACTCAAGGGGTTGGAAGAGAAGATTAGAGAGTTAGAAGTTTTGATGGGTGAGTTTGGCTGTTTGAACAAGATGGGTTTCTATTGTAATTTGATTAGGGGGTATGTTAAGTCAGGGAATTTGGCTTCTATGGAGGCAACTGTTGTTAGATTTCTGAATAATGGAGGTGGGAAGGATTGCAGTTTTGGTGTTGAAACTTTCTGTGAAATGATTAAGGCTTATTTTCAGAAGGGAAATATCAAGGGGTTGGCAAATTTGATTATTGAAGCTCAGAAGATAGAGGGTTCAAATATTGTGGTTGATAGGTCTATAGGGTTTGGTATTGTTAATGCGTGTGTTAGTATTGGACTATCTGATAAAGCACACAGTATTCTTGATGAGATGAATGTTCTGGGGGCCTCTGTGGGTCTTGGGGTTTATGTACCTATCTTGAAGGCTTACTGTAAAGAAAATAGAACTGCTGAGGCTACTCAATTGGTGATGGAGATTAGTAATTCAGGTCTTCAGTTGGATGTGGGGACCTATGATGCTTTGATAGAAGCATCCATGTGCAGCCAAGATTTTCAGTCAGCGTTTTCCCTGTTTAGGGACATGAGAGAGGCAAGGATTCCTGACTTGAAAGGGAGTTACTTAACTATAATGACAGGTTTGATGGAGAATCATCGGCCTGAGATGATGGCAGCTTTCATGGATGAGGTGGTTGAGGATCCTAGGATTGATGTTGGTACTCATGATTGGAATTCTATCATCCATGCTTTCTGTAAAGCTGGGAGACTTGAAGATGCAAGAAGGACTTTCAGAAGGATGATGTTCCTGCAGTTTGAGCCAAATGGTCAGACATACTTGTCCATGATTAATGGATATGTCTTGGCTGAGAAATATTTTCTCGTGCTGATGTTGTGGAACGAGGTTAAGAGGAAGCTATCCATGAATGGGCAGAAGGGGATGAAGTTTGACCACAATTTGGTTGATGGATTCCTGTATGGTCTGGTAAAGGGGGGCTTCTTTGATGCTGTTATGCAAGTTGTGGAGAAAGCTAATGAGTTGAAAATATTTGTTGACAAGTGGAGATACAAGCAAGCATTCATGGAGACCCATAAAAAGCTCAGGGTGGCAAAGTTAAGGAAAAGAAATTTTAGAAAAATGGAAGCACTTATTGCTTTCAAGAACTGGGCTGGGTTAAATGCATGA 1965 0.4499 MTKRVVSFLLPYRALSSSTPETPSLYSFLQPSVFSITRNKQQPISETPPKPPSCLSPSQLSTLQTNLHKSLLSSNTDEAWKSFKALTTHQAFPPKPLTNSLLSHLSSLGDTLNLKRAFASALFLMEKNPLLLHHDTLHHMLLCMRDANTAAPPFALVKSMLRNRFFVPFHVWGPVLVEISRNCGNVAAFLRLFEENCRVALEEKIEFMKPDVGACNAALEGCCCELESVSDAERIVGTMSSLGVRPDEFSFGFLGYMYALKGLEEKIRELEVLMGEFGCLNKMGFYCNLIRGYVKSGNLASMEATVVRFLNNGGGKDCSFGVETFCEMIKAYFQKGNIKGLANLIIEAQKIEGSNIVVDRSIGFGIVNACVSIGLSDKAHSILDEMNVLGASVGLGVYVPILKAYCKENRTAEATQLVMEISNSGLQLDVGTYDALIEASMCSQDFQSAFSLFRDMREARIPDLKGSYLTIMTGLMENHRPEMMAAFMDEVVEDPRIDVGTHDWNSIIHAFCKAGRLEDARRTFRRMMFLQFEPNGQTYLSMINGYVLAEKYFLVLMLWNEVKRKLSMNGQKGMKFDHNLVDGFLYGLVKGGFFDAVMQVVEKANELKIFVDKWRYKQAFMETHKKLRVAKLRKRNFRKMEALIAFKNWAGLNA 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01664 654 Pfam PPR repeat family 504 546 IPR002885 -
Spst2g01664 654 PANTHER BNAC05G43320D PROTEIN 15 653 - -
Spst2g01664 654 Pfam Pentatricopeptide repeat domain 417 461 IPR002885 -
Spst2g01664 654 Pfam PPR repeat 367 388 IPR002885 -
Spst2g01664 654 NCBIfam pentatricopeptide repeat 504 535 IPR002885 -
Spst2g01664 654 Gene3D Tetratricopeptide repeat domain 276 391 IPR011990 GO:0005515
Spst2g01664 654 Gene3D Tetratricopeptide repeat domain 392 462 IPR011990 GO:0005515
Spst2g01664 654 Gene3D Tetratricopeptide repeat domain 174 275 IPR011990 GO:0005515
Spst2g01664 654 Gene3D Tetratricopeptide repeat domain 463 625 IPR011990 GO:0005515
Spst2g01664 654 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 211 246 IPR002885 -
Spst2g01664 654 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 500 534 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01664 208 606 Glycosyltransferase AT1G05670 19.250 5.48e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01664 - - gmx:100811600 1102.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01664 2 15622257 15624221 Spst2g01664 2 15622257 15624221 ECH