Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01636 ATGACGGTGACAGAGTGTTGTTATGCAGTGGGCTTCATCTTCTGTGCATTATTTGCAGTGGTGAAATGGAACACCGTACGGTACTCTAGAAAAGGTATGCCTCCAGGATCATTAGGTTACCCTTTCATTGGGGAGACTCTCCCATTTCTCAAACAAGGACCCCTTTTCATCAAACGAGGCAGATCAAGATATGGAAATCTCTTTAAGACTCATGCATTAGGTTCTCCTGTTGTTATTAGCATGGATCCTGACGTCAATAGATACATACTCTTGAATGAAGCAAAAGGCTTGGTTCCTGGGTACCCCGATTCCATGAGGAAGATCCTAGGAACTAACATTGCTGAGGTTCATGGTGCAGTCCACAAACGAGTCAGAGGCTCACTTTTATCTCTCATTGGTCCAATGGCAGTTAAGGATCGTCTTTTGCCAGAAGTTGACGAGTTCATGAGGTCTTTCCTTGACAATTGGGATGGTAAAACAGTTGATCTTCAGGAAAAAACTGTGGAGATTGCATTCTTTAGCTCCCTGAAAGCTATCGTAGAAGATGAGCCAAACTCTTTCCTCGAGTCCTTTAAAGCTATATTTGATAAAATGGCAGTAGGAACTTTATCCTTGCCATTTAAAATTCCAGGAACTGAATTTTATCGAGGGATGAAGGCTAGGGAAAAATTGCTTACATTGCTGAGAGATCTCATAGGCAAGAGAAGAGCTTCCTCAGCTACTCATGATGACTTTCTTGAACACCTCATAAAAACTGAGAATGTCAATCAGAAGCTAGATGATGACGAAATAATTGAACAAATCATCACTCTCTTATATTCGGGTTATGAAACTGTCTCAACTACTACAATGATGATTATCAAATACCTAAATGATAACCCTAGCTTTCTACAGGAAGCTGAACATTTTGCAATCATGCAAAAGAAATTGCCAGGGGAACGGATCAACTGGGATGACTACAAGAATATGAGCCAAACTCGTGCGGTGATACTTGAAACCATGAGATTGGCTAGTGTTATTTCTGGAGTGATGAGGAGGACTACTAATGATATAGAATTGAATGCTAACATTGATGGTGCCTATCACTTGTTAGGGTTTATCATTCCCAAGGGGTGGAGAGTTTATGTTTACACAAGGGAGATTAACTTTGATCCCATCCTTTATGAAGAACCTTCTACTTTTAACCCAAGGAGATGGCTGGAGAAAGGGTTGGAGACTCATAATCACAACATGCTGTTTGGAGCAGGAGGCAGGGTGTGTCCTGGAAAGGAATTAGGCTTGGTTAAAATCAGTCTTTTCATTCACTATTTTGTGACTAAATACAGGTGGGAAGAAGCAGAGGGAAACAAGAAACTGATGAAATTCCCCAGAGTGTTGGCACCAGAAGGGCTACATATGAAAATTACAAAGTACTAA 1416 0.4089 MTVTECCYAVGFIFCALFAVVKWNTVRYSRKGMPPGSLGYPFIGETLPFLKQGPLFIKRGRSRYGNLFKTHALGSPVVISMDPDVNRYILLNEAKGLVPGYPDSMRKILGTNIAEVHGAVHKRVRGSLLSLIGPMAVKDRLLPEVDEFMRSFLDNWDGKTVDLQEKTVEIAFFSSLKAIVEDEPNSFLESFKAIFDKMAVGTLSLPFKIPGTEFYRGMKAREKLLTLLRDLIGKRRASSATHDDFLEHLIKTENVNQKLDDDEIIEQIITLLYSGYETVSTTTMMIIKYLNDNPSFLQEAEHFAIMQKKLPGERINWDDYKNMSQTRAVILETMRLASVISGVMRRTTNDIELNANIDGAYHLLGFIIPKGWRVYVYTREINFDPILYEEPSTFNPRRWLEKGLETHNHNMLFGAGGRVCPGKELGLVKISLFIHYFVTKYRWEEAEGNKKLMKFPRVLAPEGLHMKITKY 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01636 471 Pfam Cytochrome P450 34 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g01636 471 PRINTS P450 superfamily signature 328 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g01636 471 PRINTS P450 superfamily signature 274 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g01636 471 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g01636 471 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g01636 471 SUPERFAMILY Cytochrome P450 26 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g01636 471 CDD CYP90-like 61 470 - -
Spst2g01636 471 Gene3D Cytochrome P450 24 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g01636 471 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
Spst2g01636 471 PANTHER CYTOCHROME P450 26 31 447 - -
Spst2g01636 471 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g01636 471 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g01636 471 PRINTS E-class P450 group I signature 263 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g01636 471 PRINTS E-class P450 group I signature 377 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g01636 471 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01636 Spst-Chr2 15319017 15322630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01636 81 471 Cytochrome P450 AT5G38970 53.671 8.87e-148 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01636 K09590 - gmx:100818004 759.214