Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01635 ATGCTCAGCTCGAGGCAATCCTTGTACATCTCTTCTTCTCCTTTCCCTTCTTCTTTTTCTTCTTCTTCGTTGTTTTGTATCATTTTCCTCCAAGTTACACTTCTCTATGGCATTGCCTTCTCTGCCAACCATGAAGCCTCAACTCTCTTCTCTTGGCTCCATACTTCTTCTGCATCACCACCCCCTCCTTCTTTCTCTAACTGGAACATCCTTGATCCAAATCCATGCAACTGGACATCTATAACATGCTCCTCACTAGGCTTTGTCACTGAAATCAACATACAATCCATCCCCCTAGAGCTTCCTATACCTTCCAACCTCTCTTCATTTCACTCTCTTCAAAAGCTTGTCATTTCAGATGCCAATCTAACTGGAAGCATCCCTTCATACATTGGTGATTGCTCTTCCCTCACTGTCATTGACCTCAGCTCTAACAATCTTGTTGGTTCAATTCCTGCCAGCATTAGCAAGCTCCAGAACCTTCAGAACTTGTCTTTGAACTCTAACCAGCTTACTGGAAGGATACCAGTGGAGTTAAAAAACTGCATTGGTTTGAAAAATCTACTTCTTTTTGACAATCAGATAATTGGGACCATCCCACCTGAGCTAGGGAAGTTGTCACAACTTGAGTCCCTAAGAGCAGGAGGAAACAAAGATATTGTGGGGAAGATTCCTGAAGAGCTTGGGGAATGCAGAAATTTGACTGTTTTGGGGCTGGCTGATACCAGAATATCTGGTTCTTTGCCTGCTTCTTTGGGTAGGCTCACAAAGCTTCAGACATTGTCCATCTACACAACCATGCTGTCTGGTGAAATTCCACCAGAGTTAGGTAACTGTTCTGAACTTGTTGACTTGTTCTTATACGAAAATAGCCTATCAGGATCAATTCCATCTGAGCTAGGTAAGCTCAAGAAGCTGGAACAGTTATTTTTTTGGCAGAATGGTCTTGTGGGGGCTATCCCAGAAGAGATTGGTAACTGTACAAGCTTGAGAAAAATTGATTTATCCTTAAATTCTCTATCTGGGACCATACCTGCATCTTTGGGGGGTCTTTTAAATCTTGAAGAGTTTATGATTAGTGATAACAATGTGTCTGGTTCAATCCCTTCCAGTCTTTCAAATGCTAAAAATCTTCAACAGTTGCAAGTTGACACAAACCAGCTCTCAGGCTTAATTCCACCAGAGCTAGGCCAATTGTCAAACCTCATGGTGTTCTTTGCTTGGCAGAACCAGCTTGAGGGAAGCATTCCCTCTACGTTGGGGAACTGTAGTAACCTTCAAGCACTAGACTTGTCACGCAATGCACTCACTGGTAGTATTCCTTTTGTCCTATTCCGGCTCCAAAACCTCACAAAACTGCTTCTGATTTCCAATGACATATCAGGTTTCATACCAAATGAAATAGGCAATTGCAGCTCTCTTATAAGGTTGAGGCTTGGAAACAATAGGATTACAGGAAGCATTCCCAGGACAATAGGCAACCTAAAGAGCTTGAACTTTTTAGACCTCTCTGGGAACCGCTTCTCAGGTCCAGTGCCTGATGAGATTGGAAGCTGCTCTGAACTGCAAATGATAGACTTCAGCAGCAACAGCTTAGAAGGCCCTCTGCCTAATTCGTTGTCTTCACTATCAGCAGTTCAGGTATTGGATGCATCTTCCAACAAGTTTTCAGGTCCTTTACCGGCAAGTTTGGGCCGTCTAGTTTTTCTGAGTAAGCTAATCCTGAACAATAACTTATTTTCTGGACCTGTTCCTGCATCATTGAGCCTATGTTCAAATCTCCAACTGCTTGATCTTAGCAGCAACAACCTCAGTGGAAACATACCAGCTGAGCTTGGCCGGATCGAGACTCTAGAAATTGCTCTTAATCTTAGCTGCAATTCACTCAGCGGAATAATCCCAGCTCAGCTATCTTCTCTTACCAAGCTTTCCATATTGGACCTCTCACACAACCAGTTGGAAGGAGATTTGCAACCTCTTGCTGAGTTAGACAACCTTGTCTCACTCAATGTATCTTACAACAAACTTTCTGGCTGTCTTCCAAATAACAAGCTTTTCAGGCAGTTGACATCAAAAGACTTCACTGCAAATCAAGGGCTCTCATGCTTTGTGAAGGATTCTAGCAAGACTGGTATGGAACTAAATGGAAATGAACTAAGGAAGTCGCAAAGGCTTAAGCTAGCCATTGGATTGCTGATAGCCTTAACAGTAATAATGATTGTAATGGGAATAACTGCTGTGATCAAAGCAAGAAGAACCATTAGGGATGATGATTCAGAATTGGGGGACTCATGGCCATGGCAATTCATACCATTTCAGAAATTAAACTTTTCAGTGGAAGAAATACTGAAGTGTTTAGTTGATAGAAATATTATTGGAAAGGGATGTTCTGGTGTTGTATATAGAGCTGAAATGGATAATGGGGAAGTCATTGCTGTGAAGAAATTGTGGCCAACAACAATTGATGCAGAAGAGGCATTTAAGGAAGAAAAAAGTGGAGTTCGTGATTCATTTTCAGCTGAGGTCAAGACACTTGGCTCAATCCGTCATAAGAACATTGTCAGATTCTTGGGGTGCTGTTGGAACAGACAAACAAGATTGCTTATTTTCGATTACATGCCGAATGGAAGTTTGAGTAGTCTACTTCATGAGAGGTCTGGAAATTCTCTGGAATGGGAACTTAGGTACAGAATCTTGTTAGGTGCTGCAGAAGGCCTTGCATATCTACATCATGACTGTGTCCCTCCTATAGTCCACAGAGATATCAAAGCCAATAACATCCTCATTGGCCTTGAATTTGAACCTTACATCGCTGACTTTGGCTTGGCTAAACTCGTTGATGATGGCGATTTTGGTCGTTCTTCCAATACAGTTGCTGGCTCCTATGGATATATTGCTCCAGAATATGGCTATATGATGAAGATCACAGAGAAGAGTGATGTTTATAGCTATGGAGTAGTTTTGTTAGAAGTCTTGACAGGTAAGCAACCAATTGATCCAACCATCCCAGATGGTCTACATGTTGTTGATTGGGTGAGACAGAAGAAAGGTCTTGAAGTGCTTGATCCAAGCTTTCTCTGTAGACCAGAATCAGAAATAGAGGAAATTATGCAGGCATTGGGAATAGCGTTATTGTGTGTGAACTCATCTCCTGATGAAAGGCCAACAATGAGAGATATCGTCGCTATGCTGAAGGAGATAAAGCATGAAAGGGAAGAGTATGCAAAATTTGATGTGCTTCTAAAAGGGTCTCCTGCAAATGATGCACGCGGGAATAAATGCTCTGGTGGAGTTCCTCTACCAACAGCTTCTTCATCAGTACCAGTCATGCAAACTTTGAAAACAAAAAGCAATAACTCAAGCTTCTCTGTGTCTTCTCTGTTCCATTCCTCTTCAAGTGTCAAGATGGGTTCCAAATGA 3420 0.4205 MLSSRQSLYISSSPFPSSFSSSSLFCIIFLQVTLLYGIAFSANHEASTLFSWLHTSSASPPPPSFSNWNILDPNPCNWTSITCSSLGFVTEINIQSIPLELPIPSNLSSFHSLQKLVISDANLTGSIPSYIGDCSSLTVIDLSSNNLVGSIPASISKLQNLQNLSLNSNQLTGRIPVELKNCIGLKNLLLFDNQIIGTIPPELGKLSQLESLRAGGNKDIVGKIPEELGECRNLTVLGLADTRISGSLPASLGRLTKLQTLSIYTTMLSGEIPPELGNCSELVDLFLYENSLSGSIPSELGKLKKLEQLFFWQNGLVGAIPEEIGNCTSLRKIDLSLNSLSGTIPASLGGLLNLEEFMISDNNVSGSIPSSLSNAKNLQQLQVDTNQLSGLIPPELGQLSNLMVFFAWQNQLEGSIPSTLGNCSNLQALDLSRNALTGSIPFVLFRLQNLTKLLLISNDISGFIPNEIGNCSSLIRLRLGNNRITGSIPRTIGNLKSLNFLDLSGNRFSGPVPDEIGSCSELQMIDFSSNSLEGPLPNSLSSLSAVQVLDASSNKFSGPLPASLGRLVFLSKLILNNNLFSGPVPASLSLCSNLQLLDLSSNNLSGNIPAELGRIETLEIALNLSCNSLSGIIPAQLSSLTKLSILDLSHNQLEGDLQPLAELDNLVSLNVSYNKLSGCLPNNKLFRQLTSKDFTANQGLSCFVKDSSKTGMELNGNELRKSQRLKLAIGLLIALTVIMIVMGITAVIKARRTIRDDDSELGDSWPWQFIPFQKLNFSVEEILKCLVDRNIIGKGCSGVVYRAEMDNGEVIAVKKLWPTTIDAEEAFKEEKSGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNRQTRLLIFDYMPNGSLSSLLHERSGNSLEWELRYRILLGAAEGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKLVDDGDFGRSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVLLEVLTGKQPIDPTIPDGLHVVDWVRQKKGLEVLDPSFLCRPESEIEEIMQALGIALLCVNSSPDERPTMRDIVAMLKEIKHEREEYAKFDVLLKGSPANDARGNKCSGGVPLPTASSSVPVMQTLKTKSNNSSFSVSSLFHSSSSVKMGSK 1139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01635 1139 FunFam LRR receptor-like serine/threonine-protein kinase 541 616 - -
Spst2g01635 1139 Pfam Protein tyrosine and serine/threonine kinase 790 1064 IPR001245 GO:0004672|GO:0006468
Spst2g01635 1139 ProSiteProfiles Protein kinase domain profile. 786 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01635 1139 ProSitePatterns Protein kinases ATP-binding region signature. 792 815 IPR017441 GO:0005524
Spst2g01635 1139 Gene3D Ribonuclease Inhibitor 41 193 IPR032675 -
Spst2g01635 1139 FunFam Nuclear pore complex protein NUP107 42 195 - -
Spst2g01635 1139 Gene3D Ribonuclease Inhibitor 408 709 IPR032675 -
Spst2g01635 1139 SUPERFAMILY RNI-like 116 485 - -
Spst2g01635 1139 SMART serkin_6 786 1068 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01635 1139 Gene3D Transferase(Phosphotransferase) domain 1 873 1082 - -
Spst2g01635 1139 ProSiteProfiles Leucine-rich repeat profile. 642 664 IPR001611 GO:0005515
Spst2g01635 1139 Pfam Leucine rich repeat 449 508 IPR001611 GO:0005515
Spst2g01635 1139 Pfam Leucine rich repeat 622 676 IPR001611 GO:0005515
Spst2g01635 1139 Pfam Leucine rich repeat 112 171 IPR001611 GO:0005515
Spst2g01635 1139 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 873 1082 - -
Spst2g01635 1139 FunFam Putative LRR receptor-like serine/threonine-protein kinase 621 706 - -
Spst2g01635 1139 ProSitePatterns Serine/Threonine protein kinases active-site signature. 917 929 IPR008271 GO:0004672|GO:0006468
Spst2g01635 1139 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 442 536 - -
Spst2g01635 1139 Pfam Leucine rich repeat N-terminal domain 43 84 IPR013210 -
Spst2g01635 1139 SUPERFAMILY Protein kinase-like (PK-like) 763 1065 IPR011009 -
Spst2g01635 1139 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g34110 769 872 - -
Spst2g01635 1139 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 314 1064 - -
Spst2g01635 1139 SUPERFAMILY L domain-like 386 703 - -
Spst2g01635 1139 PRINTS Leucine-rich repeat signature 640 653 - -
Spst2g01635 1139 PRINTS Leucine-rich repeat signature 426 439 - -
Spst2g01635 1139 Gene3D Phosphorylase Kinase; domain 1 771 872 - -
Spst2g01635 1139 SMART LRR_typ_2 303 327 IPR003591 -
Spst2g01635 1139 SMART LRR_typ_2 663 688 IPR003591 -
Spst2g01635 1139 SMART LRR_typ_2 640 659 IPR003591 -
Spst2g01635 1139 SMART LRR_typ_2 495 519 IPR003591 -
Spst2g01635 1139 SMART LRR_typ_2 351 375 IPR003591 -
Spst2g01635 1139 SMART LRR_typ_2 591 615 IPR003591 -
Spst2g01635 1139 SMART LRR_typ_2 447 471 IPR003591 -
Spst2g01635 1139 SMART LRR_typ_2 158 182 IPR003591 -
Spst2g01635 1139 Gene3D Ribonuclease Inhibitor 194 294 IPR032675 -
Spst2g01635 1139 Gene3D Ribonuclease Inhibitor 295 394 IPR032675 -
Spst2g01635 1139 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 218 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01635 Spst-Chr2 15299902 15303595 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01635 40 1125 Receptor kinase-like Gene Family AT5G56040 48.413 0.0 986
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Spst2g01635 PK_Tyr_Ser-Thr 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01635 - - gmx:100818541 1953.33