Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01624 ATGAAAGACTCTCACATAGTAGAGTCAAGTAGGTATGCCAGTAGCTTTGCACTGCACCTCTTTTTGTTGTCGTCACTGTTCTTCGATTTGGTCACTTGTGGTTCAATTAATGTTCCAGATACAGTGCTCCTAAATTGTGGTTCTAATGAAGCATCACAATTCAATGGAGAAAATTGGATAGGAGATGTTGGATCTAATTTCTTGCCACCAGAGTATGAAAAGAGTTCATCTCCACTCTTGATCTCGAACATACACTCTGGAGAACCAAAAGTTCCATACTCAACAGCAAGAATAACCTACTCTCCATTGACCTACTCGTTCCCTTCCTCCCCTGGCCTTAAATTCGTTCGAGTTTACTTTCTCTCATCTTTATATCTGATGATGAACCCCTCCAAGGCTTATTTCTCAGTAAAAGCAGGCCCATACACTCTTCTAAGTGATTTTAATCCTTCTGTTTTTGCAGAAGAGCTTAACTTGGTGTCTTTCACCAAGGATTTCTTAGTCAATGTTAGGGAAGACAAACTGAACATTACATTTACTCCATCTCCTTTAATTTCCAATGCATTTGCCTTTGTAAATGGCATTGAGACATTCCCAGTGCCCCACACTATATACTTTCCAGGTTCCAAGATTCCTGTTCCGTATATTGGGCAACAAAAACCTTTGTTTATTAATGGTGAATATGCTCTTGAGACGCTTTACCGTGTTAGCATTGATAGTGACCTCACTGATGTTAAAAATGCTTTTGGATTATGGTTAGATGATGATAGATACATATCCAGTTCACAATATGGAAGTGTCCTCGATATAAAGTCTCGTACTGTTTCCTTGAATTACACCATCTTATCTTCAAAGGATTACAATTATTCAGCACCAGCAGAGCTATATTTGACTGCCAGGACCATGGATAGTAATGGAGATGCTAACATCAAGTACAACTTAACATGGTTTTTCCCTGTTGATTCAGGATTCAAATACCTTGTTAGGCTTCATTTCTGTGAGATATCTATGATGGTGACGCAGCCCAATCAAAGGGTGTTCAAGGTGTACATAAACAACCAAACAGCTGAGGAGAGGATGGACGTAGTTGCGTTAGCTGGTGCACCACTTACTCCTGTACACAAGGACTACGTTGCTATGGTTCCTAACGAAAGTGGGAGAAGGAATTATTTGTCGATCTCACTTCACCCTAACATGGAGCCAAAACCAAAATATGCTGATGCCATACTGAATGGAATTGAGATCATGAAGATAAGTGATAGCGATGGTAGTCTTGCAGCAATGTTCCAATTCAGACGGGAACAAAGAAATAAGAAATTTCAACATGTCATTATTGTGGCTGGTGCTACCTTAGGTGCCATTTTGGGACTGCTCTTAACATCTTTTATTCTTATCAGCAGAGCACGGAAAAAATTGAAGTGGAGAACTTCTCATATACTCCCATCAAATTCTAGTAGTAGTCACAAAAACATTCAACCAACAGTAACCTCAGGTCTTTGCCATCAATTCACATTTGCAGAAATCAGCATAGCAACAAGCAACTTCAGTGAAGCTCTTGTCATTGGGGAGGGAGGCTTCGGAAAGGTGTACAAAGGCATCATGCAACATGATGGATATACTCCTGTTGCAGTAAAGCGCTCTAATCGTAGTTCTCGCCAAGGATATAAAGAGTTTCAAAATGAGATCAATATTTTTTCATTTTGTCACATGAATTTAGTTTCACTGTTGGGATACTGCCAAGAAGCAAATGAACTGATACTTGTCTATGAATACATGACTCAAGGCCCTCTGTGTGACCATTTGTACAAGAAACAAAAACAGCCACTGTCTTGGATTCAAAGACTAAGGATTTGTGTTGGTGCAGCTCGAGGAATTCACTATCTCCACACTGGCACGACCCACCCAGTGATACATCGTGATATCAAGTCAGCCAACATATTATTGGATCAGAATTGGGTTGCCAAGATTGCAGATTTTGGGTTGTGTAGAACGGTTCCCTCACTTTGCCACTCACATGTTAGCACTGAGGTTAAGGGCACTTATGGGTATTTAGATCCTGAGTACTATAAGAGAAGAAAGTTGACTGAAAAATCTGATGTGTATTCATTCGGAGTGGTTTTGTTTGAGGTGTTGTGTGGAAGACCAGCTGTGAATCCCGTGGCAGTGGAAGAGGAAAATGAGAAAGTTGGGTTGGCCACCTGGGCCATGCACTGTTACCAGTGTGGAACCGTTGATAAATTAGTTGATCCTCATTTAGAAGGGAATGTTAGGGCAGAATGCCTGAGAGATTTTGTGGACATAGGCATCCAGTGCTTAGCTAATAGAAGTGCAGATAGGCCAACTATGGGGGAGGTGCTGAGTTCGTTGGAGAAGATTCTTTGCTTGCAGGAATTTTTTTTGAAAGGCAACTAG 2412 0.408 MKDSHIVESSRYASSFALHLFLLSSLFFDLVTCGSINVPDTVLLNCGSNEASQFNGENWIGDVGSNFLPPEYEKSSSPLLISNIHSGEPKVPYSTARITYSPLTYSFPSSPGLKFVRVYFLSSLYLMMNPSKAYFSVKAGPYTLLSDFNPSVFAEELNLVSFTKDFLVNVREDKLNITFTPSPLISNAFAFVNGIETFPVPHTIYFPGSKIPVPYIGQQKPLFINGEYALETLYRVSIDSDLTDVKNAFGLWLDDDRYISSSQYGSVLDIKSRTVSLNYTILSSKDYNYSAPAELYLTARTMDSNGDANIKYNLTWFFPVDSGFKYLVRLHFCEISMMVTQPNQRVFKVYINNQTAEERMDVVALAGAPLTPVHKDYVAMVPNESGRRNYLSISLHPNMEPKPKYADAILNGIEIMKISDSDGSLAAMFQFRREQRNKKFQHVIIVAGATLGAILGLLLTSFILISRARKKLKWRTSHILPSNSSSSHKNIQPTVTSGLCHQFTFAEISIATSNFSEALVIGEGGFGKVYKGIMQHDGYTPVAVKRSNRSSRQGYKEFQNEINIFSFCHMNLVSLLGYCQEANELILVYEYMTQGPLCDHLYKKQKQPLSWIQRLRICVGAARGIHYLHTGTTHPVIHRDIKSANILLDQNWVAKIADFGLCRTVPSLCHSHVSTEVKGTYGYLDPEYYKRRKLTEKSDVYSFGVVLFEVLCGRPAVNPVAVEEENEKVGLATWAMHCYQCGTVDKLVDPHLEGNVRAECLRDFVDIGIQCLANRSADRPTMGEVLSSLEKILCLQEFFLKGN 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01624 803 PANTHER OS03G0124300 PROTEIN-RELATED 18 475 IPR046957 GO:0004672
Spst2g01624 803 Pfam Malectin-like domain 44 418 IPR024788 -
Spst2g01624 803 FunFam FERONIA receptor-like kinase 228 419 - -
Spst2g01624 803 Gene3D Transferase(Phosphotransferase) domain 1 592 798 - -
Spst2g01624 803 FunFam FERONIA receptor-like kinase 41 201 - -
Spst2g01624 803 Gene3D - 229 419 - -
Spst2g01624 803 Gene3D - 41 199 - -
Spst2g01624 803 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Spst2g01624 803 ProSitePatterns Protein kinases ATP-binding region signature. 521 545 IPR017441 GO:0005524
Spst2g01624 803 SMART serkin_6 515 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01624 803 Gene3D Phosphorylase Kinase; domain 1 477 591 - -
Spst2g01624 803 CDD STKc_IRAK 521 792 - -
Spst2g01624 803 FunFam Receptor-like protein kinase FERONIA 592 802 - -
Spst2g01624 803 Pfam Protein tyrosine and serine/threonine kinase 520 788 IPR001245 GO:0004672|GO:0006468
Spst2g01624 803 FunFam receptor-like protein kinase FERONIA 478 591 - -
Spst2g01624 803 ProSiteProfiles Protein kinase domain profile. 515 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01624 803 SUPERFAMILY Protein kinase-like (PK-like) 486 789 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01624 Spst-Chr2 15177727 15180138 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01624 30 797 Receptor kinase-like Gene Family AT3G51550 44.665 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Spst2g01624 Malectin_like 5.6e-27 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01624 - - gmx:100776324 1204.89