Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01623 ATGATACACAGAATTATGGATACTATCACATGCTCTACGTACATTTTTATCTTGTGTATCTTACAATTACATCTATTTTCAGTTGCTGATAATGCCAGTTATGTTCCTAGGGAGAACATAGTTCTCAACTGCGGCTCCAACATATCAGAATTTGTACAAAATGATGGCAGGAATTGGAGTGGTGACGTTGCTTCACCATATGTTCCGTCCAATGCTGAAACCAAGTCCCGTATGGCCAGGGCTCCTCACACCCTTCAATCTATTCCAGAAGTACCCTACATGACTTCTAGGATCTTTCAGTCTCAATTTACCTACACGTTCAATGTAACCCCAGGTCCCAAATTCATTCGCCTTCACTTCTACCCAGCTTCCTACTTGGATCTCAACATCTCCAATGCTTTTTTATCAGTAAGTGCTGCTAACTGCACTCTTCTCCGCAACTTCAGTGCTTCCCTCAACGCTGATTACTTCAACTTAGCCTATTTCATGAAAGAATTCATTGTGCATGTAAATGGGAGTGTTTTACAACTCACTTTTGCCCCATCGTATAATGATTCTGATGCCTTTGCTTTTGTGAATGGGATTGAAGTTGTCTCAATGCCACTTAATTTATACACTAGTGGTGATGTCCCTCTTCTTTTAGTTGGCCATGGTTCCAAAGTTGTGTACATAGAAAATGATTCTGCCATGGAAAACTTGTACAGATTGAATGTAGGAGGTGAACAAATCCCACCTAAAGATGACACGGGCATGTTTCGGAGATGGGACACCGACGAAATTTACATTTTAGGGACTGATTTGGGTATTCAACTCTCAAATATGAGCATGCCAGTTTTGTATACTAATCATGTTTCACCATATTCAGCCCCAGCAGATGTGTACCGCACATCCCGTTCAATGGCAAGTTTTGATGGTGGACTTGTAAATTTAAATTACAATATGACATGGTTTTTTCCCGTTGATTCGGGTTTCCTTTATATAGTTAGACTTCACTTCTGTGAACTTGATACATATATAACAAAGATCAATCAGGCAGTTTTTTCTGTGTTTTTAAATAATCAAACAGCTGACGAACAACTCGATGTAATTGCTTGGAGTGGGGGCCCCGGAATTGCTGTATACAGGGACTATGTAGTGTTGGTTCCCCATGTTATCGAGGGAAAGCAGGATTTGTGGCTTGATCTGCACCCATACAAGGATTCTAAACCTATGTACTATACTTCTTACTTGAATGGTGTGGAGATCTTTAAACTGAGCAACTTTGGTGATAAGAATCTTGCAGGGCTCAACCCTTCTCAAAGTGTCATTTCTGGATCGGAAGTAAAGGCTCCCCGTGTTGTACAAATAAAGAAACTCAAATTCATCCTCGTTGGATGTGGACTCGGTACAGTGGTGCTATCAATTCTCCTTTGCTTAGTAGTTCTATACAAGTTAGGGGTGATTAGGCCTACAAGGGTCATGTCATGGTGCGGTCTTGTTGTACACAGTCCTGATCAAGTTGAAAAGGCAAAGAAGTCATCACTTTGCACTTACTTTTCATTGAGAGACATAAAAGTGGCTACAAATGACTTCGATGAGGCTTTACTTACAGGCATTGGTGGATTTGGCACAGTTTACAAGGGTACCTTCGACGGTGGTGCAACTTATGTGGCCATAAAACGTGCCAACCCAATGTCAGAGCAAGGTGTTTCAGAATTCGAGACAGAGATTCTTTTGCTCTCACAACTTAGGCATCATAACCTAGTCTCTCTTTTGGGTTATTGCAATGAGGAAGGGGAGATGATATTGGTATATGATTTCATGGCCAATGGAAGTCTACATGATCATCTTCATTTGAGGCAGAGAGATCAATCCCCTTTGGCTTGGATTCAACGTCTTGAGATATGCATTGGAGTTGCAAGAGGTTTGCACTACCTTCACACTGGCACAAAGCACAGGATCATCCACCGTGACATCAAGACAACCAACATACTCTTAGATCATAATTGGGTGCCCAAAATTTCAGATTTTGGGTTGTCAAAGGCAGGTTACCTTTCCTCAGCCACCACCAACGTGAAGGGTAGCATTGGTTACCTAGATCCTGAGTGCTATCAAAGCCACAAGTTGTCTGAGAAATCTGATATATACTCACTTGGGGTGGTGTTATTAGAGGTTCTTACAGCAAGGGCAGCTGTGAGTGTAGGTGAAGATGATGAGCATATTAACTTGGCTGAATGGACTACGTTGTGCTTTGAGAGTGGCAATGTGGAGCAAATAGTTGATCCCAACTTGAAAGAAAACATAATTAAGGAGTGCTTTGAGTTATACTTAGGAGTTGCAATGAAATGTTTGGCTGAAAGAGGGGTAGCGAGGCCATCCATTGGTGAAGTGTTAGAGAACCTTGTTCTGGCAATGCATCTTCAGAAAAATGAAGGTACTGTCCCAGATAGAAATGTACATAAAAATGATAATGCTGTTTTGCAGGGTAATTCAGATTTGACACCTGGGGTTGAGTTCTCTGAAATCATGATGCATACTGCTCGGTGA 2526 0.4149 MIHRIMDTITCSTYIFILCILQLHLFSVADNASYVPRENIVLNCGSNISEFVQNDGRNWSGDVASPYVPSNAETKSRMARAPHTLQSIPEVPYMTSRIFQSQFTYTFNVTPGPKFIRLHFYPASYLDLNISNAFLSVSAANCTLLRNFSASLNADYFNLAYFMKEFIVHVNGSVLQLTFAPSYNDSDAFAFVNGIEVVSMPLNLYTSGDVPLLLVGHGSKVVYIENDSAMENLYRLNVGGEQIPPKDDTGMFRRWDTDEIYILGTDLGIQLSNMSMPVLYTNHVSPYSAPADVYRTSRSMASFDGGLVNLNYNMTWFFPVDSGFLYIVRLHFCELDTYITKINQAVFSVFLNNQTADEQLDVIAWSGGPGIAVYRDYVVLVPHVIEGKQDLWLDLHPYKDSKPMYYTSYLNGVEIFKLSNFGDKNLAGLNPSQSVISGSEVKAPRVVQIKKLKFILVGCGLGTVVLSILLCLVVLYKLGVIRPTRVMSWCGLVVHSPDQVEKAKKSSLCTYFSLRDIKVATNDFDEALLTGIGGFGTVYKGTFDGGATYVAIKRANPMSEQGVSEFETEILLLSQLRHHNLVSLLGYCNEEGEMILVYDFMANGSLHDHLHLRQRDQSPLAWIQRLEICIGVARGLHYLHTGTKHRIIHRDIKTTNILLDHNWVPKISDFGLSKAGYLSSATTNVKGSIGYLDPECYQSHKLSEKSDIYSLGVVLLEVLTARAAVSVGEDDEHINLAEWTTLCFESGNVEQIVDPNLKENIIKECFELYLGVAMKCLAERGVARPSIGEVLENLVLAMHLQKNEGTVPDRNVHKNDNAVLQGNSDLTPGVEFSEIMMHTAR 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01623 841 CDD STKc_IRAK 531 794 - -
Spst2g01623 841 FunFam FERONIA receptor-like kinase 228 419 - -
Spst2g01623 841 FunFam FERONIA receptor-like kinase 39 201 - -
Spst2g01623 841 Pfam Protein kinase domain 531 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01623 841 PANTHER OS03G0124300 PROTEIN-RELATED 13 475 IPR046957 GO:0004672
Spst2g01623 841 Gene3D Phosphorylase Kinase; domain 1 491 600 - -
Spst2g01623 841 Gene3D Transferase(Phosphotransferase) domain 1 601 818 - -
Spst2g01623 841 SMART serkin_6 524 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01623 841 ProSiteProfiles Protein kinase domain profile. 524 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01623 841 Gene3D - 228 417 - -
Spst2g01623 841 Gene3D - 39 201 - -
Spst2g01623 841 FunFam receptor-like protein kinase FERONIA 493 600 - -
Spst2g01623 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Spst2g01623 841 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 601 807 - -
Spst2g01623 841 Pfam Malectin-like domain 42 417 IPR024788 -
Spst2g01623 841 SUPERFAMILY Protein kinase-like (PK-like) 501 794 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01623 Spst-Chr2 15173908 15176433 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01623 25 830 Receptor kinase-like Gene Family AT3G51550 48.694 0.0 745
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Spst2g01623 Malectin_like 5.5e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01623 - - gmx:100776859 1335.86