Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01621 ATGGACATAGTTGCTTCGGCGGGAGCACCATTTATTCCTTTACACAAGAACTATGTTGTTATGGTTCCTACGGAGAGTGGGAGAAGGAAAGATTTGTGGATCTCACTTCACCCTAACTTAGAGGCAAAACCAAAATATGCTGATGCCATACTGAATGGAATTGAGATCATGAAGATAAGTGATAGCAATCTTAGTCTTGCAGCAATGTTGCAATTGAGAAGAGGACAAAGAAAGAAGAAAGTTCAACATGCAATTATTGTAGCTGGTGCTACTTCGGGTACCATTTTGGGACTGCTCTTCACATTTTTCATTCTTATCCGCAGATCACTTAAAAAATTGAAGTGGGCTTCTTATATACTCCCATCAAATTCAAGTAATACTCTCAAAAACGTTCAACCCACAGTAACCTCAGGTCTTTTCCATCAATTCACATTTGCAGAAATCAGCATAGCTACATGCAACTTCAGTGAAGCTCTTGTCATTGGGGAGGGAGGCTTCGGAAAGGTGTACAAAGGCATCATGCAATATGATGGATTTACTCCTGTTGCACCATTGCCATGGATTCAAAAAAAGATCTGTGTTGGTGCAGCTCGAGGACTACATTATCTCCACACTAGCACAAGGCACCCAGTTATTCACCGTGATGTGAAGTCAGCCAACATATTATTGGATCAGAATTGGGTAGCCAAGATTGCAGATTTTGGGTTGTGTAGAACAGTTCCCTCACTTTACCACTCACATGTTAGCACTGAGGTTAAATGTACTCCGGGATATTTAGACCCTGAGTACTACATGAGAAGAAAACTGACAAAAAAATCTGATGTGTATTCATTTGGAGTGGTTTTGTTTGAAGTGTTTTGTGGAAGACCGGCTGTGAATCCTGTGGCAGTGGAAGAGGAAAGTGAGAAAGTTGGGTTGGCCATACACCGAGACTTTGCAGTGATGGTTCCCCATGTTAATGAGGGAAAGCAAGATTTATTTATTATGGCTTGA 993 0.4119 MDIVASAGAPFIPLHKNYVVMVPTESGRRKDLWISLHPNLEAKPKYADAILNGIEIMKISDSNLSLAAMLQLRRGQRKKKVQHAIIVAGATSGTILGLLFTFFILIRRSLKKLKWASYILPSNSSNTLKNVQPTVTSGLFHQFTFAEISIATCNFSEALVIGEGGFGKVYKGIMQYDGFTPVAPLPWIQKKICVGAARGLHYLHTSTRHPVIHRDVKSANILLDQNWVAKIADFGLCRTVPSLYHSHVSTEVKCTPGYLDPEYYMRRKLTKKSDVYSFGVVLFEVFCGRPAVNPVAVEEESEKVGLAIHRDFAVMVPHVNEGKQDLFIMA 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01621 330 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Spst2g01621 330 SMART serkin_6 155 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01621 330 ProSiteProfiles Protein kinase domain profile. 18 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01621 330 SUPERFAMILY Protein kinase-like (PK-like) 141 300 IPR011009 -
Spst2g01621 330 Pfam Protein tyrosine and serine/threonine kinase 191 293 IPR001245 GO:0004672|GO:0006468
Spst2g01621 330 Gene3D Transferase(Phosphotransferase) domain 1 181 321 - -
Spst2g01621 330 PANTHER OS07G0166700 PROTEIN 141 177 IPR045272 GO:0004714|GO:0006468
Spst2g01621 330 Gene3D Phosphorylase Kinase; domain 1 125 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01621 Spst-Chr2 15159122 15160307 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01621 185 300 Receptor kinase-like Gene Family AT3G51550 65.812 1.39e-49 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Spst2g01621 PK_Tyr_Ser-Thr 9.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01621 - - gmx:100776324 249.595