Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01579 ATGGTTCCTAATGAGATCAGCGGAGTCCACTATCTAGCACATGAAAATCCATTCCTAGTTCCACCCAACTTTGGCCTTCTGCAAAGTGACATCCCAAACCTCCATCTCAACGCCCTCCTAAGCAACTTTCCAAACTGCCACTTCCCTCCTTCAGGCCTCGAATTTGTTGTTCCTCCCTCCTCATGCCTCAGCAGCAACTCAACCTCTGATGACGCTGATGAAATCCAGTTCAACATCATCGACGAAAGGAAGCACAGGAGAATGATATCGAACCGAGAATCCGCCCGCAGATCGAGGATGAGGAAGCAAAAGCACTTGGATGAACTGTGGTCACAGGTTGTTAGGCTCAGAACTGAGAACCACAACCTTATTGACAAACTCAACCATGTGTCTGAGTCCCATGACAGAGTCCTCCAAGAGAATGCACGCCTCAAGGAAGAAGCTTCTGATCTTCGCCAAATGATAGCAGACATGCAAATTGGGACCTCCTTTGCTTGCACTATGGAAGATTTGGAGGACTTACCATGCAACAAACCTGATCCCTCAAACCAATCAATCACTCCTGCTGACATGATTCATGAATGA 585 0.4735 MVPNEISGVHYLAHENPFLVPPNFGLLQSDIPNLHLNALLSNFPNCHFPPSGLEFVVPPSSCLSSNSTSDDADEIQFNIIDERKHRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENHNLIDKLNHVSESHDRVLQENARLKEEASDLRQMIADMQIGTSFACTMEDLEDLPCNKPDPSNQSITPADMIHE 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01579 194 CDD bZIP_plant_GBF1 84 135 IPR045314 GO:0003700|GO:0006355
Spst2g01579 194 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 81 144 IPR004827 GO:0003700|GO:0006355
Spst2g01579 194 SUPERFAMILY Leucine zipper domain 83 133 IPR046347 GO:0003700|GO:0006355
Spst2g01579 194 SMART brlzneu 79 143 IPR004827 GO:0003700|GO:0006355
Spst2g01579 194 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 86 101 IPR004827 GO:0003700|GO:0006355
Spst2g01579 194 MobiDBLite consensus disorder prediction 178 194 - -
Spst2g01579 194 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 9 166 IPR044521 -
Spst2g01579 194 Coils Coil 127 161 - -
Spst2g01579 194 MobiDBLite consensus disorder prediction 175 194 - -
Spst2g01579 194 FunFam BZIP transcription factor 81 132 - -
Spst2g01579 194 Gene3D - 81 136 - -
Spst2g01579 194 Pfam bZIP transcription factor 83 140 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01579 Spst-Chr2 14582548 14583132 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01579 28 171 bZIP Transcription Factor Family AT3G30530 56.627 6.15e-50 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst2g01579 bZIP_1 1e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01579 - - gmx:778126 356.295