Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01568 ATGGGTAACTGCCTAGATTCTTCTGCCAAAGTTGATGCAGCTCAGAGCTCCAGATCCACTTCTGGAATCTCAAAAACTACACCTTCCAGCTTATCTATTCCATCATACAGTGAAAAAAGCAACGCCTCAAGTCTTCCCACACCAAGGTCTGAGGGTGAAATCTTGTCTTCTCCCAATCTTAAGCCCTTCACATTCAATGAGCTGAAGAATGCCACCAGAAATTTTCGGCCTGATAGTCTTCTTGGTGAAGGGGGATTTGGATACGTCTACAAAGGATGGATTGATGAACACACATTTACAGCTTCAAGACCTGGCGCAGGAATGGTTGTTGCTGTAAAGAGGCTTAAACCTGAAGGTTTTCAAGGTCATAAAGAGTGGTTGACTGAGGTTAACTACCTTGGACAACTGTACCATCCTAATCTGGTTAAATTAATTGGTTACTGCTTGGACGGAGAGAATCGGCTTTTGGTCTATGAGTTTATGCCTAAAGGGAGCTTAGAGAACCATCTGTTTAGAAGAGGACCACAACCACTCTCTTGGTCGGTGAGGATGAAAGTGGCTATTGGTGCTGCTAGAGGACTCTCTTTTCTTCATAATGCCAAATCACAAGTCATATACCGTGATTTTAAAGCCTCTAACATCCTACTTGATGCGGAGTTCAATGCTAAACTCTCTGACTTTGGTTTAGCTAAGGCGGGTCCTACTGGTGATAGAACTCACGTGTCAACTCAAGTCATGGGTACTCAAGGATATGCAGCACCTGAATATGTTGCAACTGGTAGGTTGACAGCCAAAAGTGATGTCTACAGCTTTGGAGTTGTGTTGCTTGAACTTTTATCTGGAAGACGTGCAGTTGATAAAACAATAGCTGGTATGGAGCAGAATCTGGTAGACTGGGCAAAACCATATTTGAGCGATAAACGAAGACTGTTTCGGATCATGGATACCAAGTTGGAGGGGCAGTACCCACAAAAGGGGGCCTTCATGGCTGCCACACTTGCTCTACAATGCCTCAACAGTGAGGCCAAGACAAGGCCTCCAATGACAGAGGTTTTAGCCACTCTGGAACAGATAGAAGCCCCTAAAACTGGAGCCAGAAACTCCCATTCAGAGCACCATAGAGTTCACACTCCTGTGAGAAAGTCTCCGGCGAGGAACCGGTCACCACTAAATCTAACTCCCACCGCATCCCCTCTTCCTGCTCACCGGCAATCGCCTCGTGTGCACTGA 1230 0.4585 MGNCLDSSAKVDAAQSSRSTSGISKTTPSSLSIPSYSEKSNASSLPTPRSEGEILSSPNLKPFTFNELKNATRNFRPDSLLGEGGFGYVYKGWIDEHTFTASRPGAGMVVAVKRLKPEGFQGHKEWLTEVNYLGQLYHPNLVKLIGYCLDGENRLLVYEFMPKGSLENHLFRRGPQPLSWSVRMKVAIGAARGLSFLHNAKSQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTQGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKTIAGMEQNLVDWAKPYLSDKRRLFRIMDTKLEGQYPQKGAFMAATLALQCLNSEAKTRPPMTEVLATLEQIEAPKTGARNSHSEHHRVHTPVRKSPARNRSPLNLTPTASPLPAHRQSPRVH 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01568 409 MobiDBLite consensus disorder prediction 360 409 - -
Spst2g01568 409 MobiDBLite consensus disorder prediction 1 58 - -
Spst2g01568 409 CDD STKc_IRAK 81 358 - -
Spst2g01568 409 FunFam Probable serine/threonine-protein kinase PBL8 161 375 - -
Spst2g01568 409 ProSiteProfiles Protein kinase domain profile. 75 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01568 409 MobiDBLite consensus disorder prediction 384 400 - -
Spst2g01568 409 Gene3D Transferase(Phosphotransferase) domain 1 161 381 - -
Spst2g01568 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Spst2g01568 409 MobiDBLite consensus disorder prediction 9 58 - -
Spst2g01568 409 Pfam Protein tyrosine and serine/threonine kinase 79 354 IPR001245 GO:0004672|GO:0006468
Spst2g01568 409 SUPERFAMILY Protein kinase-like (PK-like) 46 355 IPR011009 -
Spst2g01568 409 FunFam Serine/threonine-protein kinase BIK1 42 160 - -
Spst2g01568 409 ProSitePatterns Protein kinases ATP-binding region signature. 81 113 IPR017441 GO:0005524
Spst2g01568 409 Gene3D Phosphorylase Kinase; domain 1 51 160 - -
Spst2g01568 409 PANTHER OS01G0588500 PROTEIN-RELATED 37 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01568 Spst-Chr2 14410097 14412745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01568 51 355 Glycoside Hydrolase AT3G07070 53.571 6.02e-112 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Spst2g01568 PK_Tyr_Ser-Thr 1.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01568 - - gmx:100809778 798.89