Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01565 ATGGGGAAAGGAAGAAGTCCTGGGAAATGGTTCAAGAACTTACTCTTGGGGAAGAAATCGTCGTCAAAGTCTACTTCATCAAAGAAGAATGATATTTTTAAACCTTCAAGTAATAAGGATGTGGTGGTGTCTTCTGAGGTACCTGTGTCTGATCCACCTGTCAATTCTTTGCTGATATCTCCACCGATATCTGGAGCTAATGATACTAAAGGAGTTCTTTTGGATAAGGAGTTAGTTAGTAGATCATCACATGATAAAGATGTTCTTTCAACCGGAGATGAAGAGGCTAAGGTGCAGGATGTTGCTAATTTGGGATCTCAGGAGGATCTTGAGAAACTTCAGCTTACAGAAGCAGCTATAAAACTTCAGGCTGCTTGTAGAAGCTATCTGGCTCGTCAAACATTTCAAACACTCAAAGGGACCATACAACTACAAGCTCTCATTCGTGGTCACTTGGTTAGAAGACAAGCTGTTTCTGCTGTATACTGTGTGAAGGGAATAGTTAAATTTCAAGCATTGGTTCGTGGTTACAATGTTAGACGTTCTGATATTGGGCTTGCCGTCCAGAAAATTTGTAAGGATACTCATTGTTCAAATTCTATTTCGGTAGTTTCATCCTCTCAGGCAAAGAAGCTGTCGGAAAATGTCTTTGTTTGCAAGCTTCTGGCTTCGTCCCCGTATGCAGTTCCTCTATCACTCACCAGTGGTCCTGTAGAACCTACTATGGCTTGGAAGTGGCTTGACTATTGGACGCAGTCACATTTTTGGGCACCTGTTCCTGCATTGAAAAAGAAATTTGACTCAGTGTCTGATGTGAAAAATGGCAGTTCTCAGACAGTACAAAGGGGACAAGTTAAAAGAAATACTCGTAAATCTCCTGCTGTGAAAGCTGACAATGGCTCGGTTTCAGTTGCTAACAAATCTAAACAGCGTCCAAAAAAAGATTCAAGCCATCCATTGCCTTCTGCTCAGGAACACCCACAAAAAGAAGCTGAGAAAAGTTGTCTTGAAAAAAAACATGCACAGAATGTTCCAAATGGATCTGAGGTTGTTAATGAAAAAAGAAAGCACACCAGTAGAAAGATTTTAGATCATATCGTCACTGACGTGTCAGAGCAGGACCCAAGTGCCTCTTCAGAGAAAATGAAAGATTTGACAGTGGCAAAGTCAGAAGAGTCTGATCCTGAGAAGGTTCATGTACATCAAGGAAAAGATGTGAATGATAATGAGCCACATGATGATCCTATTGCTGTCTCAAAGACTAGTGAAAAGAAGGGTGAAAATGATGGAATTCAAGGAGTCAGTGAGGATCTGAATGGTGGTGGTGACAATTGTATCAGTAACAATTGCCAGAGAAGAGCTTCACTACCTGCTAACTTTAGTGATCAAGATACTGAGTTATATACTACTCCTGTTACGCCAAGACTGCCCAGTTATATGGCTCCTACCGAATCTGCAAAGGCTAAGCTAAGAGGACAAGGCTCCCCAAGATTTGCTACTGATTTGGTAGAAAAAAGCAGTACAGCCAGGCGGCATTCACTTTCATCCTCACTTAATGGCAGGTCAGGTTCATTTTCCCCGAGAGCTGAACGGCTGATAGCCGCCAGTGGCAGAGGAATGATAAGGTCTGATAGATCTCTGTCATCTTCAAGGGATGGAACTGAGAAATTGATCCAACCTCAGTGGAGAAGGTGA 1695 0.4206 MGKGRSPGKWFKNLLLGKKSSSKSTSSKKNDIFKPSSNKDVVVSSEVPVSDPPVNSLLISPPISGANDTKGVLLDKELVSRSSHDKDVLSTGDEEAKVQDVANLGSQEDLEKLQLTEAAIKLQAACRSYLARQTFQTLKGTIQLQALIRGHLVRRQAVSAVYCVKGIVKFQALVRGYNVRRSDIGLAVQKICKDTHCSNSISVVSSSQAKKLSENVFVCKLLASSPYAVPLSLTSGPVEPTMAWKWLDYWTQSHFWAPVPALKKKFDSVSDVKNGSSQTVQRGQVKRNTRKSPAVKADNGSVSVANKSKQRPKKDSSHPLPSAQEHPQKEAEKSCLEKKHAQNVPNGSEVVNEKRKHTSRKILDHIVTDVSEQDPSASSEKMKDLTVAKSEESDPEKVHVHQGKDVNDNEPHDDPIAVSKTSEKKGENDGIQGVSEDLNGGGDNCISNNCQRRASLPANFSDQDTELYTTPVTPRLPSYMAPTESAKAKLRGQGSPRFATDLVEKSSTARRHSLSSSLNGRSGSFSPRAERLIAASGRGMIRSDRSLSSSRDGTEKLIQPQWRR 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01565 564 Pfam IQ calmodulin-binding motif 165 181 IPR000048 GO:0005515
Spst2g01565 564 Pfam IQ calmodulin-binding motif 116 136 IPR000048 GO:0005515
Spst2g01565 564 Pfam IQ calmodulin-binding motif 140 156 IPR000048 GO:0005515
Spst2g01565 564 Pfam Protein of unknown function (DUF4005) 463 543 IPR025064 -
Spst2g01565 564 ProSiteProfiles IQ motif profile. 139 166 IPR000048 GO:0005515
Spst2g01565 564 MobiDBLite consensus disorder prediction 350 368 - -
Spst2g01565 564 MobiDBLite consensus disorder prediction 16 51 - -
Spst2g01565 564 MobiDBLite consensus disorder prediction 308 339 - -
Spst2g01565 564 MobiDBLite consensus disorder prediction 509 524 - -
Spst2g01565 564 PANTHER IQ-DOMAIN 5-RELATED 1 521 - -
Spst2g01565 564 Gene3D - 112 161 - -
Spst2g01565 564 MobiDBLite consensus disorder prediction 542 556 - -
Spst2g01565 564 MobiDBLite consensus disorder prediction 376 431 - -
Spst2g01565 564 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Spst2g01565 564 SMART iq_5 114 136 IPR000048 GO:0005515
Spst2g01565 564 SMART iq_5 162 184 IPR000048 GO:0005515
Spst2g01565 564 SMART iq_5 137 158 IPR000048 GO:0005515
Spst2g01565 564 MobiDBLite consensus disorder prediction 17 44 - -
Spst2g01565 564 MobiDBLite consensus disorder prediction 501 564 - -
Spst2g01565 564 MobiDBLite consensus disorder prediction 268 440 - -
Spst2g01565 564 MobiDBLite consensus disorder prediction 271 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01565 Spst-Chr2 14338581 14342281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01565 4 564 IQD Protein Family AT1G14380 34.206 2.76e-79 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01565 - - gmx:100800548 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01565 2 14338581 14342281 Spst2g01565 2 14338581 14342281 ECH
Spst2g01565 2 14338581 14342281 Spst3g04678 3 98580588 98587808 ECH
Spst2g01565 2 14338581 14342281 Spst9g02325 9 54566902 54574271 ECH