Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01564 ATGAAGAAAAATGATTTGGTAAGAGTAAAGGGTGAGAAGGAAGAAGAGATTTCGGAAGGTGAGGTGTGGATCAAAGTTGCCGTTTTTGGTTGCAACGAAGGGAACAGTGAGAAACTGAAGGGACATGGAAGGAAGAGAAAGGCACAATTAACGACAAGTGAGAACAGAATCCTTCTCCAAGTTCAGAAGTTTCTTGAGTATCCTCAAGTTCTTCAAGGATGGACCAACTTGACCAAATTCTGCTCCCTCCCTCCCTCACCTTCTATCAACATTGTGTGCTCCAATGGCCATGTAACCGAGTTAACCATCATTGGGAACAAAAGCTCCCCTTCTTCTCAAAGAATCCAACTTGTGTCTTGGAATTCATCTGAGATTCTCTCAAAAAGATTCTCCATTGAGTCTTTCTTTACTGTCCTGACAAAGCTCTCAAATATGAAGGTGTTGTCATTGGTGTCACTTGGTTTGTGGGGTCCTTTACCTTCCAAGATAAACAGATTCAGGTTTCTTGAAGTGCTGAATGTAAGCTCAAACTTCATTTATGGGGAAATCACACCATCAGTCTCCTCTTTGAAAAATCTAACGAGTCTTGTTTTGGCTGATAATCTTTTCAATGGGAGTGCTCCTGATCTTGGAAGACTGGCTTCTCTTGAAGAGCTCAATTTGGGTGGCAACAAACTGGGTCCTGAATTCCCTTCATTGAGCAAGAATCTCGCAAGGGTTATCTTGAGAAACAACTCTTTGAGATGTAGAATCCCTCCCCAACTCATGCATGTTTATAACCTTCAGATATTTGACATCTCTTCCAATGCAGTATTTGGAAATGTTCCATCGTTTATTTTCTCTCTTCCTTCCCTCAAGTACCTAAACTTGGCTGCAAACCAATTGAGTGGTGCCCTTTCTGTGAATGTATCGTGCAGTTTTGCTCTAATATTTGTTGATATCTCACACAACCTCTTGGTGGGAACATTGCCACCATGCATAGGTTCAAAGGCTTTAAACCGAACAACACGTTATTCTGGGAATTGTTTGTCAACCAGAAGCTTAAATGATCAATATCCATCTTCTCATTGCCAGAAAGTGGAGGCCTTAGCTGTTAGACCTTTACCTAGAAGCCAGAAGAAGGAATCAAAGATGCAACTAGACGTAAAACTTGGAATTATTTGTGTTGTGGGAACTGCAGGGCTTTTTCTGGTTCTTCTCATTCTGTGTATCTTCAGAAAGTTCAAATCAGAAAAATCAGACAGTAATTATAAAACACGGATCTCTGCTGCTGCTGATGTCCGTGCATATCCAAGATCAAATATTGACGCAAAACATGTTCCTCTAGCAACCAGGCAAACTTTTCTTGGATTCCCACCATACTTCATCTTTTCATTAGAAGAAATTGAAGATGCTACAAATAACTTTGATCCATCAAATCTAGTTGCAGAAGGATCACAAGGACAGCTATATAATGGTTGGCTCTTAAATGGTTCAATGGTCACGGTCAATCGTGTAAAACTAAAGCAGAAGTGTTTGCACAATAACATTATTGAGAGCTTGAAGGTATTACCCTATTTAAGGCACGGGCATTTGGTGAGTGTTCTAGGACACTGTGTCACTACTCAACAGGATCGTCCCCAAAAGATAAGCACCATATTTGTTGTATTTGAGCATGTGTCAAACGTGTCATTGAGGGATTACCTTGCAGATGGGATAAAAAAGGAAATGTTGAACTGGCCACAGAGAATGGCAATCAGCATAGGCATTGCGAGAGCAATCCAGTTCTTACACACCAGAGTTCGTCCTGGCATATTTGGCAACAATATAAAGATTGAGAATATTCTGTTGGATGACACCCTCAATGCAAAAGTTAGTGGATACAGCATTCCATGGCCATCCAAGAAAAGTCTTGACAGCAAACTTTGTGACCAAAGACCCCTCAATCAAATTGGAAGCATCAATAACGCAGAAAAGGAGGATATATATCAGTTTGGTGTTATTCTACTTGAAGTTATCACTGGCAAACTAATTACATCTTGCAGTGAAGAAGAGAAGCTGAAGGATGAGCTGGAGAAAGGTTTATTAGAAGCTGCATCACCATCACTAAGAGGTGCATCGCCAATACTAACGGGTGTGTCCGATTTTTCCATCCGGGAAACTTGTGTGTATGAATCATTGAGGACTGCAGTTCAGATTACCATCAGTTGTCTCAGCAAGGATTCCAGTAATCGCCCTTCAATAGAGGATATTCTCTGGAATTTGCAGTACTCCATGCAAGTTCAAGAGCCGAGGATCAGTGGTGTAAACCTCTTTACAAAAGTGTAA 2307 0.4088 MKKNDLVRVKGEKEEEISEGEVWIKVAVFGCNEGNSEKLKGHGRKRKAQLTTSENRILLQVQKFLEYPQVLQGWTNLTKFCSLPPSPSINIVCSNGHVTELTIIGNKSSPSSQRIQLVSWNSSEILSKRFSIESFFTVLTKLSNMKVLSLVSLGLWGPLPSKINRFRFLEVLNVSSNFIYGEITPSVSSLKNLTSLVLADNLFNGSAPDLGRLASLEELNLGGNKLGPEFPSLSKNLARVILRNNSLRCRIPPQLMHVYNLQIFDISSNAVFGNVPSFIFSLPSLKYLNLAANQLSGALSVNVSCSFALIFVDISHNLLVGTLPPCIGSKALNRTTRYSGNCLSTRSLNDQYPSSHCQKVEALAVRPLPRSQKKESKMQLDVKLGIICVVGTAGLFLVLLILCIFRKFKSEKSDSNYKTRISAAADVRAYPRSNIDAKHVPLATRQTFLGFPPYFIFSLEEIEDATNNFDPSNLVAEGSQGQLYNGWLLNGSMVTVNRVKLKQKCLHNNIIESLKVLPYLRHGHLVSVLGHCVTTQQDRPQKISTIFVVFEHVSNVSLRDYLADGIKKEMLNWPQRMAISIGIARAIQFLHTRVRPGIFGNNIKIENILLDDTLNAKVSGYSIPWPSKKSLDSKLCDQRPLNQIGSINNAEKEDIYQFGVILLEVITGKLITSCSEEEKLKDELEKGLLEAASPSLRGASPILTGVSDFSIRETCVYESLRTAVQITISCLSKDSSNRPSIEDILWNLQYSMQVQEPRISGVNLFTKV 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01564 768 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 81 349 - -
Spst2g01564 768 Gene3D Ribonuclease Inhibitor 51 370 IPR032675 -
Spst2g01564 768 Gene3D Phosphorylase Kinase; domain 1 437 539 - -
Spst2g01564 768 SUPERFAMILY Protein kinase-like (PK-like) 448 748 IPR011009 -
Spst2g01564 768 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 553 763 - -
Spst2g01564 768 Gene3D Transferase(Phosphotransferase) domain 1 553 760 - -
Spst2g01564 768 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 51 235 - -
Spst2g01564 768 Pfam Protein kinase domain 476 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01564 768 SUPERFAMILY L domain-like 107 345 - -
Spst2g01564 768 ProSiteProfiles Protein kinase domain profile. 469 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01564 Spst-Chr2 14332329 14338019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01564 47 677 Miscellaneous Gene Families AT2G02780 46.789 1.40e-174 515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Spst2g01564 Pkinase 3.8e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01564 - - gmx:100800018 1081.24