Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01549 ATGGCTAGGGAGGACATCCAGATCAGCATCCCGCATGCTGTGTATTGTGCTAATGTTGCAGAGGAGGACCCATATCAGTTATGTATCTTTGAGCGGAGATTACTGAGTTCAGCCCAGTTTTTATTTCTGGGTCTTGTGGGTTACCCGGAACTAGTAGATATGGGGTTGGGTGCTGAGAATGGTAAGGTGGTGGAGGCTTGGGATGTGTGTAAAGCAAAGGGGAGGAAGAAGAAAGGGGATGATGAAGTGGAAGAGACTGGGTCTGGGTGTTGGCTTAAGCTGAGGTTCATTGGGAGCTGCATTTCGTCAAGATCCAAGGTCGATACCTCAGTCAGTGGCAGTGGCACCAGTACTCATTACGCTGAAAGTAAATCAACTAATGATACTAGTAGAGACCAACCAACGGCTCCAGCAGTCTCTTCTACAACCACTAGTAATGCAGAAAGCAATTCATCCACTTCCAGACTTGAAGAAGAGCTTAAAATTGCTTCCAGATTGCGAAAGTTCTCTTTCAATGACCTTAAGTTAGCCACCAGAAATTTTCGGCCTGAGAGTTTTCTTGGTGAAGGTGGGTTTGGATGTGTTTTCAAAGGGTGGATTGAAGAAAATGGAACTGCTCCAGTGAAACCTGGCACAGGGCTTACGGTTGCTGTAAAAACCCTCAACCATGATGGGCTACAGGGTCACAAAGAATGGCTGGCTGAAGTAAATTTTCTTGGCGACCTAGTTCATCCGAACCTTGTTAAACTTGTAGGTTATTGCATTGAAGATGATCAAAGGTTGCTAGTGTATGAGTTCATGCCTCGGGGTAGCCTAGAGAATCACTTGTTTAGGAGATCCCTGCCTCTTCCATGGTCCATTAGAATGAAAATTGCCCTGGGAGCTGCTAAGGGTCTTGCTTTTCTTCATGAAGAAGCTGATCGACCAGTAATATATAGGGATTTCAAAACTTCAAATATACTTTTAGATGCAGAGTACAATGCCAAGCTCTCAGACTTTGGTCTTGCCAAAGATGGTCCAGAAGGTGATAAAACCCATGTATCTACTCGAGTGATGGGAACCTATGGCTATGCCGCACCAGAATATGTGATGACAGGCCATCTTACATCAAAAAGTGATGTGTACAGTTTCGGAGTGGTACTACTTGAGATGTTGTCTGGCAGAAGATCCATGGACAAACAAAGACCCAATGGTGAGCATAACCTTGTGGAATGGGCTCGGCCGCATCTAGTAGAGAGGAGAAAGTTCTACAAATTGTTAGACCCTCGCTTGGATGGCCACTATTCGGTGAAAGGAGCTCAGAAAGCTGCTCAACTGGCTGCTCACTGCCTTAGTAGAGATCCAAAGGCCAGGCCTCTAATGAGTGAAGTTGTAGAAGCTTTAAAGCCTTTGCCAAACCTCAAGGACATGGCAAGCTCTTCATATTATTTCCAGGCAATGCAAGCTGACCGCATTGGAGCGAGCCCCAACACAAGAAATGGGCGAACACAAGGAGCATTGCTCACCCGCAATGGACACCAACAAAGGAGTCTTTCTATACCAAATGATGTACCTTCTGTCAAAGCATTTGTTCATGGAGTTCTTGAGGGCAAAAGAAGCATGTTGCTTTATGATGTTATGTTATGGCTTTAG 1632 0.4528 MAREDIQISIPHAVYCANVAEEDPYQLCIFERRLLSSAQFLFLGLVGYPELVDMGLGAENGKVVEAWDVCKAKGRKKKGDDEVEETGSGCWLKLRFIGSCISSRSKVDTSVSGSGTSTHYAESKSTNDTSRDQPTAPAVSSTTTSNAESNSSTSRLEEELKIASRLRKFSFNDLKLATRNFRPESFLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEADRPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLSGRRSMDKQRPNGEHNLVEWARPHLVERRKFYKLLDPRLDGHYSVKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQAMQADRIGASPNTRNGRTQGALLTRNGHQQRSLSIPNDVPSVKAFVHGVLEGKRSMLLYDVMLWL 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01549 543 MobiDBLite consensus disorder prediction 106 156 - -
Spst2g01549 543 ProSitePatterns Protein kinases ATP-binding region signature. 187 219 IPR017441 GO:0005524
Spst2g01549 543 Pfam Protein tyrosine and serine/threonine kinase 186 461 IPR001245 GO:0004672|GO:0006468
Spst2g01549 543 Gene3D Phosphorylase Kinase; domain 1 140 266 - -
Spst2g01549 543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Spst2g01549 543 ProSiteProfiles Protein kinase domain profile. 181 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01549 543 FunFam Probable serine/threonine-protein kinase PBL8 267 482 - -
Spst2g01549 543 SUPERFAMILY Protein kinase-like (PK-like) 159 461 IPR011009 -
Spst2g01549 543 FunFam Serine/threonine-protein kinase BIK1 148 266 - -
Spst2g01549 543 Gene3D Transferase(Phosphotransferase) domain 1 267 482 - -
Spst2g01549 543 PANTHER OS01G0588500 PROTEIN-RELATED 143 464 - -
Spst2g01549 543 CDD STKc_IRAK 187 464 - -
Spst2g01549 543 MobiDBLite consensus disorder prediction 106 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01549 Spst-Chr2 14201101 14205363 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01549 128 461 Glycoside Hydrolase AT3G07070 52.522 1.03e-114 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Spst2g01549 PK_Tyr_Ser-Thr 3.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01549 - - gmx:100305443 850.892