Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst2g01548 | ATGGGGTTGGGTGCTGAGAATGGTAAGGTGGTGGAGCCTTGGGATGTGTGTAAATCAAAGGGGAGGAAGAAGAAGAAAGGGGATGAGGAAGTGGAAGGGGCTGGGACTGGGTGTTGGCTTAGGCTGAGGTTCATTGGGAGCTGCATTTCCTCAAGATCCAAGGTCGATACCTCAGTCAGTGGCAGTGGCACCAGTACTCATTATGCTGAAAGTAAGTCAACTAATGATACTAGTAGAGACCAACCAACAGCTCCAGCAGTCTCTTCTACAACCACTAGTAATGCAGAAAGCAATTCATCCACTTCCAAACTTGAAGAAGAGCTTAAAATTGCTTCCAGACTGCGAAAGTTCTCTTTTAATGATCTTAAGTTAGCCACTAGAAATTTTCGGCCTGAGAGTTTTCTTGGTGAAGGTGGGTTTGGTTGTGTTTTCAAGGGGTGGATTGAAGAAAATGGAACTGCTCCAGTGAAACCTGGCACAGGGCTTACAGTTGCTGTAAAAACCCTCAACCATGATGGGCTCCAGGGTCATAAAGAGTGGCTGGCTGAAGTAAATTTTCTTGGTGACCTAGTTCATCCGAACCTTGTTAAACTTGTAGGTTACTGCATTGAAGATGATCAAAGGTTGCTAGTGTATGAGTTCATGCCTCGGGGTAGCCTAGAGAATCACTTATTTAGGAGATCTCTACCTCTTCCATGGTCTATTAGAATGAAAATTGCTCTAGGAGCTGCTAAGGGTCTTGCGTTTCTTCATGAAGAAGCTGAACGACCAGTAATATATAGGGATTTTAAAACTTCAAATATACTATTAGATGCAGAGTATAATGCCAAGCTCTCAGACTTTGGTCTTGCCAAAGATGGCCCAGAAGGTGATAAAACCCACGTGTCTACTCGAGTGATGGGAACCTATGGTTATGCAGCACCAGAATATGTCATGACTGGTCATCTTACATCAAAGAGTGATGTGTACAGTTTTGGAGTAGTACTACTTGAGATGTTGACTGGCAGAAGATCCATGGACAAACACCGACCCAATGGTGAGCATAACCTTGTGGAATGGGCTCGGCCACATCTAGTAGAGAGGAGAAGGTTCTACAAGTTGATAGACCCTCGCTTGGAAGGCCATTTTTCGATAAAAGGAGCTCAGAAAGCTGCCCAACTAGCTGCTCACTGCCTTAGTAGAGATCCAAAAGCCAGGCCTCTAATGAGTGAAGTTGTGGAAGCTTTAAAGCCTTTGCCAAACCTCAAGGACATGGCAAGCTCTTCATATTATTTCCAGACAATGCAAGCTGATCGCTTTGGAGCGAGCCCCAACACAAGAAACGGACGAACACAAGGAGCATTGCTCACCCGCAATGGACACCAGCAAAGGAGTCTTTCAATACCAAATGGTACCTATGCATCTCCTTATCACCATCAGTTTCCTCAACCGTCACCAAAACCCAATGGCAAAGCATAG | 1458 | 0.4499 | MGLGAENGKVVEPWDVCKSKGRKKKKGDEEVEGAGTGCWLRLRFIGSCISSRSKVDTSVSGSGTSTHYAESKSTNDTSRDQPTAPAVSSTTTSNAESNSSTSKLEEELKIASRLRKFSFNDLKLATRNFRPESFLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKHRPNGEHNLVEWARPHLVERRRFYKLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQADRFGASPNTRNGRTQGALLTRNGHQQRSLSIPNGTYASPYHHQFPQPSPKPNGKA | 485 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst2g01548 | 485 | CDD | STKc_IRAK | 135 | 412 | - | - | |
Spst2g01548 | 485 | FunFam | Probable serine/threonine-protein kinase PBL8 | 215 | 430 | - | - | |
Spst2g01548 | 485 | ProSiteProfiles | Protein kinase domain profile. | 129 | 415 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst2g01548 | 485 | Pfam | Protein tyrosine and serine/threonine kinase | 134 | 409 | IPR001245 | GO:0004672|GO:0006468 | |
Spst2g01548 | 485 | MobiDBLite | consensus disorder prediction | 450 | 485 | - | - | |
Spst2g01548 | 485 | ProSitePatterns | Protein kinases ATP-binding region signature. | 135 | 167 | IPR017441 | GO:0005524 | |
Spst2g01548 | 485 | MobiDBLite | consensus disorder prediction | 450 | 472 | - | - | |
Spst2g01548 | 485 | MobiDBLite | consensus disorder prediction | 54 | 101 | - | - | |
Spst2g01548 | 485 | FunFam | Serine/threonine-protein kinase BIK1 | 96 | 214 | - | - | |
Spst2g01548 | 485 | Gene3D | Phosphorylase Kinase; domain 1 | 88 | 214 | - | - | |
Spst2g01548 | 485 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 258 | 270 | IPR008271 | GO:0004672|GO:0006468 | |
Spst2g01548 | 485 | MobiDBLite | consensus disorder prediction | 54 | 104 | - | - | |
Spst2g01548 | 485 | Gene3D | Transferase(Phosphotransferase) domain 1 | 215 | 430 | - | - | |
Spst2g01548 | 485 | PANTHER | OS01G0588500 PROTEIN-RELATED | 92 | 412 | - | - | |
Spst2g01548 | 485 | SUPERFAMILY | Protein kinase-like (PK-like) | 107 | 409 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst2g01548 | Spst-Chr2 | 14195208 | 14198542 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst2g01548 | 76 | 409 | Glycoside Hydrolase | AT3G07070 | 53.709 | 1.19e-117 | 350 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Spst2g01548 | PK_Tyr_Ser-Thr | 1.4e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst2g01548 | - | - | gmx:100305443 | 896.345 |