Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01522 ATGTCTTCCTCCACCTTCATCATTCTCTTCTTCCTCTCCCTCTTCACACCCTCCAACACTCAAACATGCTGTTCTAACTCAAACTCTCATCCCTGCCCTCCCTTCTCCTCTAACCCCCCTTTCCCTTTCTCCTCCACCCCTGGCTGTGGCCACCCCTCCTTCCACCTAACCTGCTCCTCCCCCCATTCTTTCATCTCCATCAACAACCTCTCCTTCTCCGTCCTCTCCTACAACCCCAACACCTCCTCCTTAACCCTCTCCCCTCACCCTCACCTCATCCCCCACCCCAACTGCCCCTCCTACCCCTCCATCCCCGATCGCCCCATCAATCTCTCCGCCACCCCCTTCCGCGTCTCCGCCGCAACCTGCTCCCGCCTCTCCTTCCTCCGCCCCTGCTCCCCCCCTTCCCTCCCCAACTGCTCCCATTGCTCCTCACAATGCCACCTCGTCAAATCCCCCTCCCACCTCCTCCCTGACTGCAGATCCACCCACCACTCGCCTCAGTACTCCGACCCCCCCTGCCAGACCGACATCCTCGGCTACCTCGAACAGTTCCTCCAAACCGGAATCCAACTCGACTGGGACCAAACCGGTGACCCCTACTTCACCAACTGCACTCTCTGCCGCGCCAACAACGGCCTCTGCGGCTTCAACTCCTCCTCCCAAAACAATCCCTTCGTCTGCCTCCGCTCCCAATCCACACTCTCCCCCCCATGGATTCGCAGATTCAAACCCAGCAAAATGGCCCTTTTCAGCACCGTCATCGCCTTCACCTCCCTGCTTCTCCTAATCTCAGTCGCCACCGCCATCCTCCGCTCCACCAGGTCAAAAGCCTCCTCCGCCACGCAGCAAGACCCCACCACGCTCTTCCTCCACCACCATCGCTCGGCAAGCCTCCTTCCCCCTGTCTTCGCCTACGACGACCTCGCCGCCGCCACCCACAACTTCGATCCTAAGCGGAAAATAGGAGACGGCGGGTTTGGCTCCGTCTACCTCGCGCAGCTCCGCGACGGGCGCCTCGCGGCGGTTAAGTATCTCCACTGCCACCACGCCTCCGCCGCGTTCTCCACCAAGTCATTCTGCAACGAGATCCTCATCCTCTCCTCGATCCACCACGCGAACCTGGTGAAGCTCCACGGGTACTGCAGCGACCCGAGGGGGCTTCTCCTCGTCTACGATTACATCCCCAACGGAACACTAGCGGAGCATTTGCACAGCCGCAAAGGATCGCTGGCGTGGCAGGTGAGGCTCGACATCGCATTACAAACGGCGTTAGCGATGGAGTATCTTCACTTCTCGGTTGTTCCGCCGGTTGTTCACAGAGATATAACGTCGTCGAATATTTTCGTGGAGAGGGACATGAGGATCAAGGTGGGGGATTTCGGCTTGTCGCGGCTTTTGGTGGTGCAGGATACGACGTCGTCTTCAAACGGGTTTGTTTGGACCGGGCCGCAAGGAACACCCGGGTATCTGGACCCAGATTACCACCGGTCATTCCGGTTGACGGAGAAGAGTGACGTGTACAGTTTCGGAGTTGTGTTGTTGGAGCTTATCTCGGGTATGAAAGCAGTGGACCAGAATAGAGACAAGCGCGAAATGGCGCTTGCGGATTTGGTTGTTTCCAGGATCCAGATGGGGCAGCTCCACCAAGTACTTGACCCGGTTTTTAAACGCTGCGACGGCAACGGAGTTGCCGCCGTAGCAGAGCTGGCGTTCCGTTGCGTGGCGGCGGATAAGGACGACCGGCCTGATTCAAGGGAGGTGGTAGAAGAGCTGCGGCGGGTGCGGAGTCGAACGTTGGCGGCGAAGGAGTGA 1815 0.5906 MSSSTFIILFFLSLFTPSNTQTCCSNSNSHPCPPFSSNPPFPFSSTPGCGHPSFHLTCSSPHSFISINNLSFSVLSYNPNTSSLTLSPHPHLIPHPNCPSYPSIPDRPINLSATPFRVSAATCSRLSFLRPCSPPSLPNCSHCSSQCHLVKSPSHLLPDCRSTHHSPQYSDPPCQTDILGYLEQFLQTGIQLDWDQTGDPYFTNCTLCRANNGLCGFNSSSQNNPFVCLRSQSTLSPPWIRRFKPSKMALFSTVIAFTSLLLLISVATAILRSTRSKASSATQQDPTTLFLHHHRSASLLPPVFAYDDLAAATHNFDPKRKIGDGGFGSVYLAQLRDGRLAAVKYLHCHHASAAFSTKSFCNEILILSSIHHANLVKLHGYCSDPRGLLLVYDYIPNGTLAEHLHSRKGSLAWQVRLDIALQTALAMEYLHFSVVPPVVHRDITSSNIFVERDMRIKVGDFGLSRLLVVQDTTSSSNGFVWTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGMKAVDQNRDKREMALADLVVSRIQMGQLHQVLDPVFKRCDGNGVAAVAELAFRCVAADKDDRPDSREVVEELRRVRSRTLAAKE 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01522 604 Pfam Protein tyrosine and serine/threonine kinase 319 592 IPR001245 GO:0004672|GO:0006468
Spst2g01522 604 Gene3D Transferase(Phosphotransferase) domain 1 395 603 - -
Spst2g01522 604 ProSitePatterns Tyrosine protein kinases specific active-site signature. 438 450 IPR008266 GO:0004672|GO:0006468
Spst2g01522 604 ProSiteProfiles Protein kinase domain profile. 316 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01522 604 FunFam LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.5 395 604 - -
Spst2g01522 604 FunFam Putative serine/threonine-protein kinase At1g18390 family 292 394 - -
Spst2g01522 604 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Spst2g01522 604 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 5 599 IPR044652 GO:0004672
Spst2g01522 604 SUPERFAMILY Protein kinase-like (PK-like) 302 595 IPR011009 -
Spst2g01522 604 Gene3D Phosphorylase Kinase; domain 1 292 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01522 Spst-Chr2 13948432 13950246 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01522 7 604 Receptor kinase-like Gene Family AT1G69910 59.490 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Spst2g01522 PK_Tyr_Ser-Thr 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01522 - - gmx:100816739 923.694