Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01507 ATGCCGTCTCACGTGGATCTGGACCGGCAGATCGAGCACCTCATGGAGTGCAAGCCTTTGCCGGAGGCGGAGGTGAAGGCGCTGTGCGATCAGGCCAGGGCGATTCTCGTCGAAGAGTGGAACGTTCAACCGGTGAAGTGTCCTGTCACCGTCTGCGGCGACATTCACGGCCAGTTTTATGATCTCATCGAACTTTTTCGGATAGGAGGAAACGCTCCCGATACGAACTACCTTTTTATGGGCGATTATGTAGATCGTGGCTACTATTCAGTGGAAACTGTTACGCTGTTGGTGGCCTTGAAAGTCCGATATAGAGATAGAATTACAATCCTTAGGGGAAATCATGAGAGTCGTCAAATCACTCAAGTGTATGGCTTCTACGATGAATGCTTGAGAAAGTATGGAAATGCAAATGTCTGGAAATTCTTTACCGACTTGTTTGATTATTTGCCTCTGACTGCCCTCATTGAGAGTCAGATTTTCTGCTTGCATGGAGGTCTCTCACCATCTTTGGATACACTGGATAATATCCGGGCGTTGGATCGCATACAGGAGGTTCCACACGAAGGACCGATGTGTGACCTATTGTGGTCTGATCCAGATGATCGTTGTGGTTGGGGAATATCTCCACGTGGTGCTGGATATACGTTCGGACAGGACATAGCTGCTCAGTTCAATCATACCAATGGTCTCTCCCTGATATCTAGAGCTCACCAGCTTGTCATGGAAGGATACAATTGGTGCCAGGACAAGAATGTGGTCACTGTCTTTAGTGCACCTAATTACTGTTATCGATGTGGGAACATGGCCGCCATACTGGAAATTGGAGAGAATATGGATCAGAATTTTCTGCAGTTTGATCCAGCTCCCAGACAAATTGAGCCTGACACTACACGAAAGACTCCAGATTATTTTTTGTAA 921 0.4712 MPSHVDLDRQIEHLMECKPLPEAEVKALCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKFFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIAAQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01507 306 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 5 306 IPR047129 GO:0004722
Spst2g01507 306 FunFam Serine/threonine-protein phosphatase 1 306 - -
Spst2g01507 306 CDD MPP_PP2A_PP4_PP6 6 290 - -
Spst2g01507 306 Gene3D - 2 306 IPR029052 -
Spst2g01507 306 Pfam Calcineurin-like phosphoesterase 48 239 IPR004843 GO:0016787
Spst2g01507 306 SMART pp2a_7 20 290 IPR006186 GO:0016787
Spst2g01507 306 PRINTS Serine/threonine phosphatase family signature 230 250 IPR006186 GO:0016787
Spst2g01507 306 PRINTS Serine/threonine phosphatase family signature 174 201 IPR006186 GO:0016787
Spst2g01507 306 PRINTS Serine/threonine phosphatase family signature 48 75 IPR006186 GO:0016787
Spst2g01507 306 PRINTS Serine/threonine phosphatase family signature 252 268 IPR006186 GO:0016787
Spst2g01507 306 PRINTS Serine/threonine phosphatase family signature 145 171 IPR006186 GO:0016787
Spst2g01507 306 PRINTS Serine/threonine phosphatase family signature 110 134 IPR006186 GO:0016787
Spst2g01507 306 PRINTS Serine/threonine phosphatase family signature 77 104 IPR006186 GO:0016787
Spst2g01507 306 SUPERFAMILY Metallo-dependent phosphatases 5 293 IPR029052 -
Spst2g01507 306 ProSitePatterns Serine/threonine specific protein phosphatases signature. 111 116 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01507 Spst-Chr2 13822992 13826413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01507 49 225 Calmodulin-binding Proteins AT5G63870 36.449 2.45e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01507 K04382 - gmx:100794029 645.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01507 2 13822992 13826413 Spst2g01507 2 13822992 13826413 ECH
Spst3g02481 3 72564851 72575843 Spst2g01507 2 13822992 13826413 PCT