Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01505 ATGTCTCGCACGTGCTCTCAGTGCGGGAACAACGGCCACAACTCTCGGACATGCACCGACGGTGGCGCCGCGTCTCCCCGGGAGAACGGCTTCATGCTCTTCGGCGTGCGAGTCACCGAAGGAATCTCTTCTTTCAGGAAGAGCGCTAGCATGAACAATCTCTCCCAGTACGACGCCGATACCAACGCTGCCGATGCCGGCTACGCCTCCGACGACGTCGTTCACGCTTCTGGCCGCACGCGCGAGCGCAAGCGAGGTGTTCCTTGGACGGAGGAGGAGCACAGGCTGTTCTTGTTAGGGTTGCAAAAAGTCGGAAAAGGAGATTGGAGAGGAATTTCTAGAAACTTCGTGAAAACTCGCACGCCAACTCAGGTCGCTAGTCACGCTCAGAAGTACTTCCTCCGTCGCCACAACCAGAACCGCCGTCGCCGGAGATCCAGCCTTTTCGACATCACCACCGATACGGTGATGGAATCTTCTACAATAATGGAAGAAGAACAAGTTCAGCAAGAAACAGCGGCGGCGCCTATCTCCACCGCATATCCACCATCGCATTACGGCGGTTTCCCGGGCGCAGGTTTCCCGATGAGTCTATCTCCGGTGGTGTTGCCGGTGAGCGGTGAGAGACTAGCCAAGCCGATCAGGCCGACGCCGATTTTGCCGGTGCCACCATCTTCAAAGATGGCTAGTTTGAACTTGAAAGAGAAAGCTTCTCCGCCAAATCTCGAGCCTTTACCACTGTCGTTGAATCTGCCACCGCCGACGCCGAGGTCACAGGGTCAGTCGCCGGCGAGCAGTGACCACTCTTCCCCGTCCTCGTCGTCATCGACGGCGGCTTTTCAGGCGATGTCTGCCGGGAAGTTCGGCGGCGGTGGGGATAGTATCATCAGCGTTGCTTGA 900 0.5756 MSRTCSQCGNNGHNSRTCTDGGAASPRENGFMLFGVRVTEGISSFRKSASMNNLSQYDADTNAADAGYASDDVVHASGRTRERKRGVPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHNQNRRRRRSSLFDITTDTVMESSTIMEEEQVQQETAAAPISTAYPPSHYGGFPGAGFPMSLSPVVLPVSGERLAKPIRPTPILPVPPSSKMASLNLKEKASPPNLEPLPLSLNLPPPTPRSQGQSPASSDHSSPSSSSSTAAFQAMSAGKFGGGGDSIISVA 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01505 299 MobiDBLite consensus disorder prediction 1 22 - -
Spst2g01505 299 FunFam transcription factor MYB1R1 87 138 - -
Spst2g01505 299 ProSiteProfiles Zinc finger CCHC-type profile. 5 20 IPR001878 GO:0003676|GO:0008270
Spst2g01505 299 Gene3D - 87 138 - -
Spst2g01505 299 MobiDBLite consensus disorder prediction 245 259 - -
Spst2g01505 299 MobiDBLite consensus disorder prediction 236 279 - -
Spst2g01505 299 NCBIfam myb-like DNA-binding domain, SHAQKYF class 84 135 IPR006447 GO:0003677
Spst2g01505 299 SUPERFAMILY Homeodomain-like 83 136 IPR009057 -
Spst2g01505 299 PANTHER TRANSCRIPTION FACTOR KUA1 1 249 - -
Spst2g01505 299 ProSiteProfiles SANT domain profile. 84 137 IPR017884 -
Spst2g01505 299 Pfam Myb-like DNA-binding domain 88 133 IPR001005 -
Spst2g01505 299 MobiDBLite consensus disorder prediction 260 279 - -
Spst2g01505 299 CDD SANT 88 133 IPR001005 -
Spst2g01505 299 SMART sant 85 135 IPR001005 -
Spst2g01505 299 ProSiteProfiles Myb-like domain profile. 81 133 IPR001005 -
Spst2g01505 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 81 137 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01505 Spst-Chr2 13804667 13806010 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Spst2g01505 Myb_DNA-binding 8.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01505 - - gmx:780554 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02483 3 72604646 72605362 Spst2g01505 2 13804667 13806010 PCT