Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01493 ATGATGCTTCTTCTTCTTGTGAGCCTTGTTGCTTTGCAAGGTTTTGTATTACCAATCTGCTATTGCCAGACCAATACTCCTCAGAATATTGAAACATTTTATCCAATTCAAACTCAAGAACCACCCCTCCCAATCCAACCTCCTGAGTCACCACCAAAGCCACATGCACCACCTCCATCACCAGGACCAGTGGCTGCAACAACAACCTTTTCATCAAGCAGTAAGGTAGGGACAGCAGTAGCTGCAACTGCAGCAGGTACTATTGTTGTTTCTGGTTTGGTTTTCTTCTTGGTTAGAAGGTGCTTCAGAACAAGGAAGAGGAAGGAAACCACAAACAGCACTGTTTCTGCTGTAGATAGGCGTGTTACACCTCAGGTTGAGGTGTTTGAGAGAGTGGAAGGAAACGTGAAGGGACTGATCGTTGATGAGGATGGTTTGGATGTGATTTATTGGAGAAAACTTGAAGGTAAAAAATTACCAGAAAAGAATTTCCAAAGGGAGGTGTTGGATTTTCCCAAAGACAAAGAAGATGATCACGAGGGGCATTTAGTGAAAAGATATGAATCCATTCAAGAAACTCCTCTTCTTCGAGAGAGATCTTCAACTTCCCACATGAATATATTTCTTCCAAAGGAGTCCTACACAATCATGAGAATTCCACCTCCTGCTCCTCCTCCCACTGTTCCTTCTTCAGTTGGAGGCTCTCCTACTCAACCATCTTCTCCATCCTTTACCCCTTCATCACCAAAACCAATCTCCAATTTTTTCTCATCAATTCCAAACATTACAAATTCTGCAACACCGATTGCCCCTCCCACAGTACCTGATAAGAAGAATGAAGCTACAATACCAGCATCAGCACCATCACCTCCTCCACCAATCCTAGACATAAAGAACTCACCACAACCACCACCTCCTCCACCAATCCTAGATAAAAAAAACTCGACACAGCCACCACCTCCTCCACCAATTCCAAATAACAAGAACTTAGCAGGAGCAGCTCCTCCTCCTCCTCCTCCTCCTCCTCCACCAATACCTCCTAGAAAGAGTCCAGCACCACCTCCTCATCCACCAAAGGCAAGTGGTTTGAAGTCATCATCAAAACCACCAGCTAACCCTATTGAAAGAATAGCAGGTACAACAAGTAAGCAAGGCAACACTTCACCTGAGGTAAAACTTAAGCCATTACATTGGGATAAGGTGAATACCAACCTTGATCACTCTATGGTGTGGGACAAAATTGACCGTGGTTCTTTCAGGGTTGATGATGATCTTATGGAAGCTCTCTTCGGGTTAGTCGCCACCAACCGAAATGATAATGCCCCCAAAGAAAATAACTCAACGAGTTCTAGCAGGGATGCTTTGGCTCCATCATCAAATGCCTTCCTTCTTGACCCAAGAAAATCACAAAACGTTGCTATTGTTTTGAAATCTCTGGCAATCTCTCGTAAGGAGATTATTGACGCACTCATTGATGGTCAAGGCCTTAACATAGAGACCATTGAAAAGCTTGGTAGAATAGCCCCAACAGAAGAAGAGCAATCACTTATACTTGCATATGAAGGAGACCCTTCAAAACTTGCTGAAGCTGAATCTTTCCTACGTCACATTCTCAAAGCTGTTCCTTCAGCATTTAAGCGATTGAATGCTTTGCTATTCAGGTTGAATTATGACTCCGAGATTCTAGAGATCAAGGAGTTTCTGCAGACCCTTGAGATCGGGTGCAAGGAGCTTCGAAACCAAGGAATGTTTGTGAAACTTCTTGAAGCAGTGCTCAAGGCTGGAAATCGCATGAATGCAGGCACTCACAGGGGTAATGCTCAAGCTTTCAACTTGGCTTCTCTAAGAAAGCTCGCTGATGTCAAGAGCACTGATGGAAAAACCACATTGCTTCACTTTGTTGTTGAAGAAGTTGTTCGTTCTGAAGGAAAACGTGCTGTTCTAAGTCGCAATCGCAGTTTGAGTCGTAGTAGCAGTAGGGACAGTAACAGTAGCGGAGACTCTCAAAACTCTTCTGGTTCAAATGAACAAAGAAAAAGGGAATATATAACACTAGGATTGCCAGTTGTGGGAGGGATCAGTTCTGAATTTTCCAACGTGAAGAAAGCTGCGGTTACAGATTACAACAGTTTTCTTGCTTCAATCTCAGCACTCTCAGCCAGGATTGTTGAGATTAGAGAACTTGTTTCCCGGTGTGGAAATGACAAAGGAGGGAACTTTGTGAGAGAAATGAACCGTTTTCTTGAAAGTGCAGAGGAAGAATTGAGATTAGTCAGGGAAGAGCAAACAAGGGTAATGCAAATTGTGAAAAGAACAACAGATTATTATCAAGGAGGAGCTTCAAAGGATAGCGCAGAACACCCTCTATATCTATTTGTCATAGTTAAGGATTTTCTGGGAATGGTTGATCAAGCATGCATTGAGATTGCTCGAAACATGCAGAAGAGAAAGACACCTAAGAGCTCAAAATGGCGACATTACTTGCTTTGTTTCATTCAAAATATGAATGAGATAGCTCCCAGTTTGTGGTGGCTCATAAGAGAGGATCTTGTGCTGCCAACTGCTAACCATTGGAGGTTTGGAAATACTGTGAAAGCAGTTTTCTTTTGCATTGATAGGGCCAGTTCTCGCTGGCATATTCAGAAGCTAAAACCATTCTTTTAG 2664 0.4302 MMLLLLVSLVALQGFVLPICYCQTNTPQNIETFYPIQTQEPPLPIQPPESPPKPHAPPPSPGPVAATTTFSSSSKVGTAVAATAAGTIVVSGLVFFLVRRCFRTRKRKETTNSTVSAVDRRVTPQVEVFERVEGNVKGLIVDEDGLDVIYWRKLEGKKLPEKNFQREVLDFPKDKEDDHEGHLVKRYESIQETPLLRERSSTSHMNIFLPKESYTIMRIPPPAPPPTVPSSVGGSPTQPSSPSFTPSSPKPISNFFSSIPNITNSATPIAPPTVPDKKNEATIPASAPSPPPPILDIKNSPQPPPPPPILDKKNSTQPPPPPPIPNNKNLAGAAPPPPPPPPPPIPPRKSPAPPPHPPKASGLKSSSKPPANPIERIAGTTSKQGNTSPEVKLKPLHWDKVNTNLDHSMVWDKIDRGSFRVDDDLMEALFGLVATNRNDNAPKENNSTSSSRDALAPSSNAFLLDPRKSQNVAIVLKSLAISRKEIIDALIDGQGLNIETIEKLGRIAPTEEEQSLILAYEGDPSKLAEAESFLRHILKAVPSAFKRLNALLFRLNYDSEILEIKEFLQTLEIGCKELRNQGMFVKLLEAVLKAGNRMNAGTHRGNAQAFNLASLRKLADVKSTDGKTTLLHFVVEEVVRSEGKRAVLSRNRSLSRSSSRDSNSSGDSQNSSGSNEQRKREYITLGLPVVGGISSEFSNVKKAAVTDYNSFLASISALSARIVEIRELVSRCGNDKGGNFVREMNRFLESAEEELRLVREEQTRVMQIVKRTTDYYQGGASKDSAEHPLYLFVIVKDFLGMVDQACIEIARNMQKRKTPKSSKWRHYLLCFIQNMNEIAPSLWWLIREDLVLPTANHWRFGNTVKAVFFCIDRASSRWHIQKLKPFF 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01493 887 ProSiteProfiles Formin homology-2 (FH2) domain profile. 383 828 IPR015425 -
Spst2g01493 887 PANTHER FORMIN-RELATED 317 817 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Spst2g01493 887 MobiDBLite consensus disorder prediction 649 678 - -
Spst2g01493 887 MobiDBLite consensus disorder prediction 218 394 - -
Spst2g01493 887 Coils Coil 741 761 - -
Spst2g01493 887 MobiDBLite consensus disorder prediction 218 232 - -
Spst2g01493 887 MobiDBLite consensus disorder prediction 285 360 - -
Spst2g01493 887 MobiDBLite consensus disorder prediction 38 69 - -
Spst2g01493 887 Gene3D Formin, FH2 domain 404 826 IPR042201 -
Spst2g01493 887 MobiDBLite consensus disorder prediction 650 678 - -
Spst2g01493 887 SUPERFAMILY Formin homology 2 domain (FH2 domain) 461 820 - -
Spst2g01493 887 MobiDBLite consensus disorder prediction 40 64 - -
Spst2g01493 887 SMART it6_source 383 817 IPR015425 -
Spst2g01493 887 Pfam Formin Homology 2 Domain 387 802 IPR015425 -
Spst2g01493 887 MobiDBLite consensus disorder prediction 233 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01493 Spst-Chr2 13685989 13688891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01493 365 818 FH2 protein (formin) Gene Family AT1G70140 57.143 2.36e-174 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01493 - - gmx:100778804 1110.13