Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01485 ATGAATTCATCCTCAGAGAACAAATCTTCTTCCGCTCCTTCTTCTTCAGGGTTGAAATTATTTGGTTTTCGTTTGAAGGCTAGCAACGATGATGATGACAACAGCGTTAAGAAAGTACAGTGTCCATTCTGCCATCGCAAATTTCAGAATTTGCAAGCAATGGGGGGTCACCAGAATGCACATAGAAGAGAAAGACAAATGGCTAGGTTGGCACAATTTGAGTATATGCGTGTACACCAAAGAAACCAAATATTCCAAGCGGTTACACCTCTTGTTGTTGCACAAGGAGCATCACCAACCTCTGCTTTCGGTGGTGCAACTCGGTTCTGGACAGCCCCTGTGGCGGAGCCACCAGGTACGCGCCACCATAACGTACAAGTATCAGTAGTAGGGGTTGACGATGATATCGATCTAGAACTGAGACTAGCTAACTCTTCTAAGGAGTCTGGGATTCGATCCTTAGGGTTGACACTGATGAGATATCCTGACAATTATAATAATGGTTTGATGATGGTCATATCTCCCAAGGTTGATTCTCCTCCTATAAGAGCCACACCAGTGTTCCTTGGCTTGGGTGTGAGGGCAATACTTAACTGCTTCTTCCATAGACAAGTGGTCCAATCCCAGAACATCACCTATCAATCACTTGAAGCTGTGGACCGCTCACTCAGATAA 675 0.4489 MNSSSENKSSSAPSSSGLKLFGFRLKASNDDDDNSVKKVQCPFCHRKFQNLQAMGGHQNAHRRERQMARLAQFEYMRVHQRNQIFQAVTPLVVAQGASPTSAFGGATRFWTAPVAEPPGTRHHNVQVSVVGVDDDIDLELRLANSSKESGIRSLGLTLMRYPDNYNNGLMMVISPKVDSPPIRATPVFLGLGVRAILNCFFHRQVVQSQNITYQSLEAVDRSLR 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01485 224 ProSitePatterns Zinc finger C2H2 type domain signature. 41 61 IPR013087 -
Spst2g01485 224 ProSiteProfiles Zinc finger C2H2 type domain profile. 39 66 IPR013087 -
Spst2g01485 224 PANTHER ZINC FINGER PROTEIN 5 5 97 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01485 Spst-Chr2 13603211 13607330 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01485 7 69 C2H2 Transcription Factor Family AT5G06650 38.462 4.70e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01485 - - pvu:PHAVU_002G076300g 244.588