Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01479 ATGCCGGGGCACCGCTCGAAGTCGGAGAAGCTCGACGACGGCGAGAAGCAGCTCCGGCGGGACCCCTACGAGGTCCTCGGCGTCTCGCGCAACTCCACGGATCAGGAAATCAAAACTGCGTACCGCAAAATGGCGCTCAAATATCATCCGGACAAGAATGCAAATGATCCTAAAGCAGCTGATATGTTTAAAGAGGTTACCTTTTCTTATAATATTCTCTCAGATCCTGACAAACGGCGTCAATACGACTCAGCTGGCTTTGAGGCTGTTGAATCAGACAACCAAGAGTTGGAGTTAGATCTTTCAAGTTTGGGTGCTGTCAATACAATGTTTGCAGCACTTTTTAGTAAACTTGGCGTGCCAATTAAGACAACTGTATCTGCATCTATTTTGGAAGAGGCACTCAATGGTTTAGTGACCATTCGTCCACTTCCATTAGGACATTATATGTCGAAAAGGGTTGAGAAGCAATGTGCACACTTCTATTCAGTTACAATAACAGAAGAGGAGGCACGAGCTGGATTTGTTTGCCGAGTACAATCGTCAGATAAAAGCAAGTTTAAGTTATTGTATTTCGATCAGGAAGACAATGGTGGTTTAAGTCTTGCACTTCAGGAAGACAGTGCAAAAACCGGGAAGGTTACCTCTGCTGGGATGTATTTTCTTGGATTTCCTGTTTATCGATTGGACCAAACAATGAACTCTATAGCTGCTGCTAAGGATCCTGACACATCATTTTTCAGAAAGCTGGATGGGTTTCAGCCTTGTGAATTAAATGAATTGAAGGCTGGTACCCATGTATTCGCTGTTTATGGCGACAACTTTTTCAAAAGTGCAAATTATACAATAGAAGCGCTGTGTGCTGCACCTTTTAGTGAAGAAAAAGAAAATTTAAGAAGTATAGAAGCTCAAATTTTGTCTAAAAGGGCCGAAATATCAAAGTTTGAGGCAGAATATCGAGAGGTTCTGGCTCAATTCTCAGAGATGACAAGCAGATATGCACATGAAATTCAATCAATTGACGAGTTACTGAAGCATAGGAATGAAATACATGCATCGTACACTATTACTCCCTTAAAACGGAGTACAAGTAAGAGCAGAAGTAAAAGTTCTTCCAAGGAGAGCAGAGAAGATGGCCAAACAAGAGAGAAGAGGAGTACAAGAGATCGGCCAAAGAAGAAGAAATGGTATAACCTCCACTTAAGAGTTGATAAGAGGAAGGCTTGCTAA 1230 0.422 MPGHRSKSEKLDDGEKQLRRDPYEVLGVSRNSTDQEIKTAYRKMALKYHPDKNANDPKAADMFKEVTFSYNILSDPDKRRQYDSAGFEAVESDNQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSASILEEALNGLVTIRPLPLGHYMSKRVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDQEDNGGLSLALQEDSAKTGKVTSAGMYFLGFPVYRLDQTMNSIAAAKDPDTSFFRKLDGFQPCELNELKAGTHVFAVYGDNFFKSANYTIEALCAAPFSEEKENLRSIEAQILSKRAEISKFEAEYREVLAQFSEMTSRYAHEIQSIDELLKHRNEIHASYTITPLKRSTSKSRSKSSSKESREDGQTREKRSTRDRPKKKKWYNLHLRVDKRKAC 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01479 409 Gene3D DnaJ domain 5 104 IPR036869 -
Spst2g01479 409 Coils Coil 298 318 - -
Spst2g01479 409 MobiDBLite consensus disorder prediction 367 386 - -
Spst2g01479 409 MobiDBLite consensus disorder prediction 1 29 - -
Spst2g01479 409 CDD DnaJ 21 75 IPR001623 -
Spst2g01479 409 ProSiteProfiles dnaJ domain profile. 21 86 IPR001623 -
Spst2g01479 409 FunFam Chaperone protein dnaJ 16 4 103 - -
Spst2g01479 409 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 6 408 - -
Spst2g01479 409 SMART dnaj_3 20 78 IPR001623 -
Spst2g01479 409 MobiDBLite consensus disorder prediction 355 397 - -
Spst2g01479 409 Pfam DnaJ domain 21 83 IPR001623 -
Spst2g01479 409 MobiDBLite consensus disorder prediction 1 23 - -
Spst2g01479 409 ProSitePatterns Nt-dnaJ domain signature. 63 82 IPR018253 -
Spst2g01479 409 SUPERFAMILY Chaperone J-domain 20 90 IPR036869 -
Spst2g01479 409 PRINTS DnaJ domain signature 41 56 IPR001623 -
Spst2g01479 409 PRINTS DnaJ domain signature 58 78 IPR001623 -
Spst2g01479 409 PRINTS DnaJ domain signature 23 41 IPR001623 -
Spst2g01479 409 PRINTS DnaJ domain signature 78 97 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01479 Spst-Chr2 13493466 13497271 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01479 19 84 C2H2 Transcription Factor Family AT1G74250 42.254 5.94e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01479 - - gmx:100800929 746.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01479 2 13493466 13497271 Spst2g01479 2 13493466 13497271 ECH