Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01471 ATGCCGATCGCCATGTCGGTCTCCTGCTCCACCTGCCTTCCCGACTCCGTCCTTCTCTGCGGCGAGGACTCATCCGGAATCTTGTCCGGAGACTCGCCGGGATGTTCCTCCGACCTCGATTCCTCGCCGCCGTCGGAGGAGGAGTCCATCGCCGGATTCATTGAAGACGAACGACATTTCGTTCCCGGATTCGAATATCTCAACAGGTTCCAATCTCGCTCTCTCGACGCCTCCGCCAGAGAAGAATCCGTTGCATGGATTCTCAAGGTGCAGGCTTATTACGCTTTTCAACCGCTCACGGCTTATCTTTCTGTTAATTACATGGATCGATTCTTGAATTCTCGGCCGTTGCCGCAAAATAATGGGTGGCCATTGCAACTTCTATCAGTTGCGTGCTTGTCTTTAGCGGCAAAGATGGAGGAACCTCTAGTTCCGTCACTGTTGGACCTTCAGGTAGAAGGTGCCAAATTCCTATTTGAGCCCAGAACAATTAGAAGAATGGAGCTACTCGTCCTGGGCGTCTTGGATTGGAGGCTAAGATCGGTGACCCCATTTAGCTTCCTCGACTTCTTTGCGTGCAAGTTAGATTCAACTGGAACTTTTACCGGGTTCCTCATTTCACGTGCTACACAAATTATCTTATCTAATATCCAAGAGGCTAGTTTTCTTGCCTATTGGCCATCGTGCATTGCTGCAGCGGCCATTCTCCATGCAGCTAACGAGATTCCTAATTGGTCTCTCGTTAGACCCGAGGATGCCGAGTCGTGGTGCGAAGGGCTAATAAAGGAGAAAATTATAGGATGCTACCAATTAATGCAAGAACTTGTGATTGACAATAACCGGAGGAAACCCCCCAAAGTGTTACCGCAGCTGCGAGTGACATCTCGGCCCCTTCTAAGGTCTAGTGTTTCGTCATTCTCAGCATCATCCTCTTCTCCTTCATCCTCATTGTCTTGTAAAAGGAGGAAATTAAATAACTGTTTGTGGGTAGATGATGACAAAGGAAACTCCAAATGA 1017 0.4877 MPIAMSVSCSTCLPDSVLLCGEDSSGILSGDSPGCSSDLDSSPPSEEESIAGFIEDERHFVPGFEYLNRFQSRSLDASAREESVAWILKVQAYYAFQPLTAYLSVNYMDRFLNSRPLPQNNGWPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKFLFEPRTIRRMELLVLGVLDWRLRSVTPFSFLDFFACKLDSTGTFTGFLISRATQIILSNIQEASFLAYWPSCIAAAAILHAANEIPNWSLVRPEDAESWCEGLIKEKIIGCYQLMQELVIDNNRRKPPKVLPQLRVTSRPLLRSSVSSFSASSSSPSSSLSCKRRKLNNCLWVDDDKGNSK 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01471 338 SMART cyclin_7 85 173 IPR013763 -
Spst2g01471 338 FunFam D2/4-type cyclin 63 180 - -
Spst2g01471 338 Gene3D - 54 242 - -
Spst2g01471 338 PANTHER CYCLINS 57 279 IPR039361 -
Spst2g01471 338 SMART Cyclin_C_2 182 309 IPR004367 -
Spst2g01471 338 SUPERFAMILY Cyclin-like 41 179 IPR036915 -
Spst2g01471 338 SUPERFAMILY Cyclin-like 164 283 IPR036915 -
Spst2g01471 338 Gene3D - 63 180 - -
Spst2g01471 338 Pfam Cyclin, C-terminal domain 182 287 IPR004367 -
Spst2g01471 338 CDD CYCLIN_AtCycD-like_rpt1 79 177 - -
Spst2g01471 338 Pfam Cyclin, N-terminal domain 52 179 IPR006671 -
Spst2g01471 338 ProSitePatterns Cyclins signature. 80 111 IPR006671 -
Spst2g01471 338 CDD CYCLIN_AtCycD-like_rpt2 182 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01471 Spst-Chr2 13439509 13441907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01471 3 338 Core Cell Cycle Gene Families AT1G70210 63.824 1.16e-140 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01471 K18810 - gmx:100780369 545.814