Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01448 ATGAGAGAAAGATTTGGAAACAAGGTAACAACAATTTTTGCAATGAAGAGAACAACTGAAAAGGGCATTGCAACCGCCACTGATTTTCAAAATGCAAACGGTAAAATGATGAACTTGGTGAATGGGGCGTCAGTTTCGATTTCATTATCAAAGCAAGCACGCCCCAACCCCACTATCACATCTCAACCATACATAGCTTCACTTGATCCATACAGAACATATAAGATAGAGCAATCAATCATGCCATTTGGTTTGGTCTCAGCCTGGAACAAGCGCCGGAGAAGCAAATCTCAAGAGCACACAGATCCCTGTATTGTGTTTCTCTCTCATGGGGTTTACAAACCTGCGCAGCTTTGGCAACTTGAAGATCAGACGCCACAACCTACAAAAAAGCTACATGGATCATCTGTTTTCACACTCAAGGAGATGGAAGAGGCAACATGTTCATTCAGTGATAAGAATCTTCTAGGAAAAGGAGGATTTGGCAAAGTCTACCGAGGCACACTGCGGTCAGGGGAGGTTGTAGCAATCAAGAAAATGGAGTTGCCAGCAATTAAAGCAGCAGAGGGGGAACGTGAGTTCCGAGTTGAAGTTGACATCCTAAGCGGACTTGACCATCCAAATCTTGTTTCTTTGATAGGCTACTGTGCTGACGGAAAGCATAGATTCCTAGTATATGAATATTTGCGAAATGGGAACCTGCAAGATCATTTAAATGGAATTGGGGAAAGAAACATGGATTGGCCTCGAAGACTCCACGTGGCACTGGGAGCTGCAAAAGGGCTTGCTTATCTCCATTCAAGTTCTGATGTTGGAATTCCTATTGTTCATAGGGATTTCAAATCGACCAATATTCTCTTAGATGACAACTTTGAAGCAAAGATATCTGATTTTGGGCTTGCCAAGTTGATGCCAGAAGGACAGGAGACACATGTGACTGCCAGAGTACTTGGTACCTTCGGCTATTTTGATCCTGAGTATACATCGACTGGAAAACTCACTCTACAAAGTGATGTTTATGCTTTTGGTGTTGTTCTTTTGGAGCTTTTGACTGGACGTCGAGCGGTGGATCTAAACCAAGGTCCCAACGATCAAAACCTTGTACTACAGGTGAGGAACATCCTGAATGACCGGAAGAAGCTTCGCAAGGTTATAGATCCAGAGATGGCTCGAAATTCTTACACCATTCAGTCTATAGTCATGTTTGCCAATCTGGCATCAAGATGTATTCGAACCGAGAGTAATGAGAGACCATCAATGGCAGAATGTGTAAAAGAACTCCTAATGATTATCTATACAAATTCAAAAGGCTTGGGTATGGTTATGCATACTTTGAGAATGATCTAG 1347 0.4254 MRERFGNKVTTIFAMKRTTEKGIATATDFQNANGKMMNLVNGASVSISLSKQARPNPTITSQPYIASLDPYRTYKIEQSIMPFGLVSAWNKRRRSKSQEHTDPCIVFLSHGVYKPAQLWQLEDQTPQPTKKLHGSSVFTLKEMEEATCSFSDKNLLGKGGFGKVYRGTLRSGEVVAIKKMELPAIKAAEGEREFRVEVDILSGLDHPNLVSLIGYCADGKHRFLVYEYLRNGNLQDHLNGIGERNMDWPRRLHVALGAAKGLAYLHSSSDVGIPIVHRDFKSTNILLDDNFEAKISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRNILNDRKKLRKVIDPEMARNSYTIQSIVMFANLASRCIRTESNERPSMAECVKELLMIIYTNSKGLGMVMHTLRMI 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01448 448 Gene3D Phosphorylase Kinase; domain 1 117 228 - -
Spst2g01448 448 CDD STKc_IRAK 156 427 - -
Spst2g01448 448 PANTHER OS01G0750732 PROTEIN 68 430 - -
Spst2g01448 448 FunFam serine/threonine-protein kinase PBS1-like 118 228 - -
Spst2g01448 448 FunFam receptor-like serine/threonine-protein kinase NCRK 229 439 - -
Spst2g01448 448 ProSitePatterns Protein kinases ATP-binding region signature. 156 179 IPR017441 GO:0005524
Spst2g01448 448 SUPERFAMILY Protein kinase-like (PK-like) 136 434 IPR011009 -
Spst2g01448 448 Gene3D Transferase(Phosphotransferase) domain 1 229 438 - -
Spst2g01448 448 ProSiteProfiles Protein kinase domain profile. 150 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01448 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Spst2g01448 448 Pfam Protein kinase domain 151 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01448 Spst-Chr2 13260952 13265698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01448 133 431 Receptor kinase-like Gene Family AT3G58690 46.711 1.37e-89 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Spst2g01448 Pkinase 4.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01448 - - aprc:113868910 706.057