Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01442 ATGGTTGTGTTGCTGTTCTTGAGTGTGGGTTTGACCACTCTCGTCAAAGCAAGCATGTCTAAAGGCATGAGCAATTTCGTTTTCGCCGCCTATTCAAACCTCTTCGGATTTTGTCTCCTGCTACTTGCAACTACCTTTCATTACAGGAACACACCTCCCAAACCGCTCAACAGCTCCATTCTCTTCAGAACTTTTCTCATCGGCTTCCTCAGCGTTCTCATTCAGACGCTTATTTATACTGGGCTTGGATATAGCTCCCCCACTCTCACCTCAGCCATAGAAGATCTACTTCCAGCTTTTACTTTCTTAATTGCCGTTGTTTTCAGGATGGAAAAATTGGACCTAAAACTAAGAAGCTGCCAAGCAAAAACCATAGGGACTGTGGTCTCAATTGGAGGGGCATTAATAGTGACTTTATACAAAGGTTTGCCTATGACAAGTGGTGTGAATTTATTTCTCCCATCTCAACAATCACAATGGATACTAGGAGGGCTTCTCCTAGCAGCTGGTACCTTTGCTGCTTCAGTCTCACTTGTTATCCAGACATGGACAATTAAGGACTACCCAGAGGAGCTAATGCTAACAACCATTGCTACCAGTTTCTCTGTAATCTTATCTTTCATAGTAGCTTTTGTTGCAGAGGAAAATCCTAAGGCATGGATACTCAAGCCAGATATGGAATTGGTGTGCATATTGTATTCAGCCATTTTTGTGATGTCTACACGAAGTGTGGTGTATGCATGGGCATGTCGAAAAAAGGGACCTGTATATGTTGCTATGTTCAGTCCTTTAGGAATTGTCATTGCACTTGCTATGGGGAATATATTTTTGGGAGACACTCTATATCTTGGAAGTGTGATTGGAGCTGCTATAATAGCTTTTGGGTTTTATGGTGTAATATGGGGTCAGGCTCAAGAGGAAAATATCTGTGAAAAATATGGAACCTCTAACATTATTTCATCGTCATCATCATCACCTTGTTCTGAAGCTACTCTGCTGCATAAAAGCAAAGACACAAGTTCTTATGTATGA 1032 0.4157 MVVLLFLSVGLTTLVKASMSKGMSNFVFAAYSNLFGFCLLLLATTFHYRNTPPKPLNSSILFRTFLIGFLSVLIQTLIYTGLGYSSPTLTSAIEDLLPAFTFLIAVVFRMEKLDLKLRSCQAKTIGTVVSIGGALIVTLYKGLPMTSGVNLFLPSQQSQWILGGLLLAAGTFAASVSLVIQTWTIKDYPEELMLTTIATSFSVILSFIVAFVAEENPKAWILKPDMELVCILYSAIFVMSTRSVVYAWACRKKGPVYVAMFSPLGIVIALAMGNIFLGDTLYLGSVIGAAIIAFGFYGVIWGQAQEENICEKYGTSNIISSSSSSPCSEATLLHKSKDTSSYV 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01442 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 304 - -
Spst2g01442 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 33 141 - -
Spst2g01442 343 Pfam EamA-like transporter family 163 300 IPR000620 GO:0016020
Spst2g01442 343 Pfam EamA-like transporter family 2 138 IPR000620 GO:0016020
Spst2g01442 343 PANTHER WAT1-RELATED PROTEIN 1 317 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01442 Spst-Chr2 13207985 13210936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01442 8 317 Nodulin-like Gene Family AT5G40240 43.168 8.61e-80 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01442 - - gmx:100792641 497.278