Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01428 ATGGCTTCTTCATTGAGGATCTCAAGGCTGATCTCTCGTTCTTTTCTTCCTGCTTCCGCTGATTCTTTGTTTTCTAGAGGTGGAAGGGATGCTCTTGGTCCAGGACTCAGTAAATTCAGCACTGCTGCTGCCACTGAAGAACCAATTAAACCAGCAGTTAAAGTAGAACACACCCAGCTGTTAATTGATGGAAAATTCGTAGATGCAGCTAGTGGAAAAACTTTTCCAACGTTGGATCCCAGGACAGGAGATGTGATTGCTCACATTGCTGAGGGTGACCATGAAGATGTTGATCGAGCAGCTGCTGCTGCTCGCAAAGCCTTCGATCATGGACCTTGGCCAAAGATGACAGCCTATGAAAGACAAAGGATATTGCTGCGTGCTGCTGATCTGTTTGAAAAACACAATGATGAGCTTGCTGCACTTGAGACATGGGATAATGGGAAGCCATATGAACAATCAGCTCAAGTTGAAATTCCAATGCTGGTTCGCCTATTTCGGTACTATGCTGGTTGGGCAGATAAGATTCATGGTCTCACAGTTCCAGCTGATGGGCCATATCATGTACAAACATTGCATGAACCCATCGGTGTGGCTGGTCAGATCATTCCATGGAACTTTCCTCTTCTCATGTTTGCCTGGAAGGTTGGCCCAGCATTGGCCTGTGGTAACACCGTTGTTATCAAAACGGCTGAGCAGACTCCATTATCTGCTCTGTATGCATCTAAGTTGCTTCATGAGGCAGGACTTCCTCCTGGTGTCCTGAATGTCATATCTGGCTTTGGTCCAACTGCTGGTGCTGCCATTGCCTCTCACATGGACATCGACAAGCTTGCTTTCACTGGTTCAACCGATACTGGAAAAGTTGTCCTTGAACTGGCAGCTAAAAGTAATCTTAAGCCTGTAACTTTGGAGCTTGGTGGCAAATCCCCTTTCATTGTATGTGAAGATGCTGATGTAGATGAGGCTGTTGAGCTAGCACACTTTGCATTATTCTTTAACCAGGGACAATGCTGCTGTGCTGGGTCTAGAACATTTGTACACGAACGTGTGTACGATGAATTTGTTGAGAAAGCAAAGGCACGTGCTTTGAAGCGCGCTGTTGGTGATCCATTCAAAGGGGGAATAGAGCAAGGTCCTCAGATTGATTCAGAACAATTTCAGAAAATATTGAAGTATATTAGATCTGGTGTTGAAAGTGGAGCTACACTTGAGACCGGAGGAGATAGATTTGGCAACTCCGGCTTCTATGTTCAACCCACTGTCTTCTCAAATGTCAAGGATGACATGGTGATTGCAAAGGACGAGATCTTTGGCCCAGTGCAATCCATATTAAACTTCAACAACCTTGATGAGGTGATTCACAGAGCAAATAACACACCCTATGGCCTTGCAGCGGGGGTGTTCACAAAAAGCATTAACACAGCAAACACTTTGACTAGAGCATTGAGAGTTGGAACAGTGTGGGTGAACTGTTTTGACACATTTGATGCTGCAATTCCCTTTGGAGGTTACAAAATGAGTGGTCAAGGAAGAGAAAAAGGAGAATACAGTCTCAAGAACTACTTGCAAGTAAAGGCTGTTGTCACATCCTTGAAGAACCCAGCTTGGCTTTGA 1617 0.4502 MASSLRISRLISRSFLPASADSLFSRGGRDALGPGLSKFSTAAATEEPIKPAVKVEHTQLLIDGKFVDAASGKTFPTLDPRTGDVIAHIAEGDHEDVDRAAAAARKAFDHGPWPKMTAYERQRILLRAADLFEKHNDELAALETWDNGKPYEQSAQVEIPMLVRLFRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVIKTAEQTPLSALYASKLLHEAGLPPGVLNVISGFGPTAGAAIASHMDIDKLAFTGSTDTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDEAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRAVGDPFKGGIEQGPQIDSEQFQKILKYIRSGVESGATLETGGDRFGNSGFYVQPTVFSNVKDDMVIAKDEIFGPVQSILNFNNLDEVIHRANNTPYGLAAGVFTKSINTANTLTRALRVGTVWVNCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTSLKNPAWL 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01428 538 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 304 311 IPR029510 GO:0016491
Spst2g01428 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 308 497 IPR016163 GO:0016620
Spst2g01428 538 FunFam Mitochondrial aldehyde dehydrogenase 2 310 499 - -
Spst2g01428 538 Pfam Aldehyde dehydrogenase family 66 528 IPR015590 GO:0016491
Spst2g01428 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 62 526 IPR016162 GO:0016491
Spst2g01428 538 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 332 343 IPR016160 GO:0016491
Spst2g01428 538 CDD ALDH_F2BC 55 530 - -
Spst2g01428 538 FunFam Aldehyde dehydrogenase, putative 500 526 - -
Spst2g01428 538 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 62 322 - -
Spst2g01428 538 SUPERFAMILY ALDH-like 54 532 IPR016161 GO:0016491
Spst2g01428 538 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 42 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01428 Spst-Chr2 12993163 12996707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01428 6 538 Aldehyde Dehydrogenase Gene Family AT3G48000 77.009 0.0 876
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01428 K00128 - gmx:100786773 1007.28