Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01417 ATGGCTAACCATTCCTTGTCAAATCGATCGTCTATATCGGATTTCGTTAAGGATTCAGCTCCGTCACCGTCGTCGCAGCCGTCATCGGGTGACGCAGAGTCTCCGCTGCCCTCGACGTCCCCACCATCGCCGCCTTCATCGTCGTCGCCGTTAACTTCACCACCATCACCGTCAACGTTACCACGGCCCCCAGAAAATTCTTCTCCTCCACGGACAACACCTCCGCCGGAGCCGAAAGAATCTCCTCCGCCGGAGCCGGAAGAATTTCCTCCGCCTGCGACAGCGAAGAAGGCGAAGAAGACGAAGAAGGCGAAATCTCCCCCACCTACTCCGTCTTATTCTCCGCCACCAACTCATTTTACTTCTCCACCACCACCAACGCCTTCTACTACTCCACCACCACCAACTCCTTCTACTTCTCCACCACCAACTCCTTCCACTTCTCCACCACCACCAACTCCTTCCACTTCTCTACCACCAACTCCTTCTACTTCTCTACCACCAACTCCTACTTCTCTACCACCAACTCCTTCGAATTCTCTACCGCCAACTCTTTCTACTTCTCCACCACCTCTCCCTTCTCCGTCGCCACCACCGCCAGATCAATCTTCTCCCCCGCCAACAAAATCTCCACCGTCTCCGCCTCCTCCGTCAACTCCCCCACCATCACAGAGTTCAGCTCCAAAACCTTCTCCGTCGGCGCCGCCGCTTTTACAACCGCTACCATCACCGCCACCTTCACAACCGCTACCATCACCGCCGCTTTCACAACGGCCACCAACGTCGCCACCTCCACCAAATTTACCTCCACCAATAACTAACGCCCCTCTTCCTCAGTCCCCTCCGCCTCCGCTTCCGCCTCCGCCTCCGCCTCCGCTTCCGCCTCCGCCTCCGCCTCCAACTGAAACTGCAACTCCACCTTCACCGGTGCCGCAACCAGTTTTTTATATTACTCCGCCGGCGCCGCCGACAGCTTCAACGCCAAAATACCCTTTTCCACTGCGATCATCACCAGTATTACCACCGGGATCACTACCAGGATTATCACCGGGATCACTACCAGAATTACCCCCGATCTTCCAACCAAAACCAAGAGATACTCTCCCGAAGAGCAAGACTCGGACGGCGTCACCAACTTCCTCCGGTAATAATACAGGAGAAATTGTTGGTCTTACTCTCGCCGGGGTTTTCATCATTGCATTTCTTGGTCTAGTTATTTTCTTTATATTCAGGAGGAGGGATAGCCGAGTGAACAACTATGGCTTGCCACCCCCTGGGAAATCTCAAATGAAAGGAGTTGTAGCAGCAGGAGATGTGCATTACTATGTAGAGGAGCCTGGTTTTGGGAATGGTGTACAACAAGGTGACATAAATTTTAGATCTAGTCCAGATCCGACTCAGCCCATGAACACTGGTAAGTTAGTTTTTACCTACGAAAAGGTTGCGGAGATCACTAACGGGTTTTCCAGCGAAAACATAATAGGGGAGGGGGGATTTGGGTATGTTTACAAGGCTTCCATGCCTGATGGCAGAATGGGGGCGATTAAGATGTTGAAGGCTGGTAGTGGGCAGGGAGAAAGGGAGTTCAGGGCTGAGGTTGATATTATCAGCAGAATCCATCATCGACATTTGGTTTCACTTATTGGTTATTGCATAGCAGAGCAACAAAGATTGCTTATCTATGAGTTCGTTCCTAATGGGAATCTCAATCAGCACTTGCATGGTAACTCATTCTCACCTGCTTATTATTGCTTGTTTGTGCCTGCCCTGCTCCTCACAGGAAGTGAATTGCCAAATTTGGATTGGTCCAAGAGGAAGAGGATAGCAATTGGTGCTGCAAGGGGCCTGTCATATCTTCATGATGGATGTAATCCAAGGATTATTCACAGAGATATTAAATCGGCAAACATACTTTTGGATAATGCTTACGAGGCACAGGTTGCGGACTTCGGGCTTGCAAGGCTAAACGACGATGGTAATACTCATGTATCAACTAGGGTGATGGGGACCTTTGGGTACATGGCTCCGGAGTATGCTACAAGTGGAAAATTAACGGATAGATCAGATGTTTTCTCTTTTGGAGTTGTTCTCCTTGAGCTTGTAACTGGAAGGAAACCTGTTGATCCAATGCAGCCCTTTGGAGAGGAGAGTTTGGTTGAGTGGGCTCGTCCACATCTCCTCCGTGCAGTTGAGACAAGAGACTTTAGTGAACTAGTAGACCCTAGGCTTGAACAACAATACATTGACAATGAAATGTTCAAAATGATTGAGGCGGCTGCAGCATGTGTTCGCCATTCTGCTCTAAAACGACCTCGTATGGTTCAGGTGGTAAGAGCCTTAGACATCGGTGATGAACTAAACGATCTATCAAATGGGGTGAAATATGGTCACAGCGCTGTTTATGATTCTGGCCAGTATAACGAAGACGTTATAAGATTCAGAAGGATGGTTAATGGAACCTTTGATGATTCTGAGTTTGATAAGTTCAGCTTGTAA 2496 0.4948 MANHSLSNRSSISDFVKDSAPSPSSQPSSGDAESPLPSTSPPSPPSSSSPLTSPPSPSTLPRPPENSSPPRTTPPPEPKESPPPEPEEFPPPATAKKAKKTKKAKSPPPTPSYSPPPTHFTSPPPPTPSTTPPPPTPSTSPPPTPSTSPPPPTPSTSLPPTPSTSLPPTPTSLPPTPSNSLPPTLSTSPPPLPSPSPPPPDQSSPPPTKSPPSPPPPSTPPPSQSSAPKPSPSAPPLLQPLPSPPPSQPLPSPPLSQRPPTSPPPPNLPPPITNAPLPQSPPPPLPPPPPPPLPPPPPPPTETATPPSPVPQPVFYITPPAPPTASTPKYPFPLRSSPVLPPGSLPGLSPGSLPELPPIFQPKPRDTLPKSKTRTASPTSSGNNTGEIVGLTLAGVFIIAFLGLVIFFIFRRRDSRVNNYGLPPPGKSQMKGVVAAGDVHYYVEEPGFGNGVQQGDINFRSSPDPTQPMNTGKLVFTYEKVAEITNGFSSENIIGEGGFGYVYKASMPDGRMGAIKMLKAGSGQGEREFRAEVDIISRIHHRHLVSLIGYCIAEQQRLLIYEFVPNGNLNQHLHGNSFSPAYYCLFVPALLLTGSELPNLDWSKRKRIAIGAARGLSYLHDGCNPRIIHRDIKSANILLDNAYEAQVADFGLARLNDDGNTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELVTGRKPVDPMQPFGEESLVEWARPHLLRAVETRDFSELVDPRLEQQYIDNEMFKMIEAAAACVRHSALKRPRMVQVVRALDIGDELNDLSNGVKYGHSAVYDSGQYNEDVIRFRRMVNGTFDDSEFDKFSL 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01417 831 FunFam Proline-rich receptor-like protein kinase PERK8 460 563 - -
Spst2g01417 831 Gene3D Phosphorylase Kinase; domain 1 456 563 - -
Spst2g01417 831 MobiDBLite consensus disorder prediction 341 385 - -
Spst2g01417 831 MobiDBLite consensus disorder prediction 108 322 - -
Spst2g01417 831 MobiDBLite consensus disorder prediction 37 91 - -
Spst2g01417 831 SUPERFAMILY Protein kinase-like (PK-like) 466 780 IPR011009 -
Spst2g01417 831 ProSiteProfiles Protein kinase domain profile. 488 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01417 831 MobiDBLite consensus disorder prediction 1 322 - -
Spst2g01417 831 FunFam proline-rich receptor-like protein kinase PERK8 589 795 - -
Spst2g01417 831 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 400 816 IPR047117 -
Spst2g01417 831 MobiDBLite consensus disorder prediction 1 36 - -
Spst2g01417 831 Gene3D Transferase(Phosphotransferase) domain 1 564 794 - -
Spst2g01417 831 MobiDBLite consensus disorder prediction 371 385 - -
Spst2g01417 831 Pfam Protein tyrosine and serine/threonine kinase 491 780 IPR001245 GO:0004672|GO:0006468
Spst2g01417 831 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Spst2g01417 831 SMART serkin_6 488 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01417 831 MobiDBLite consensus disorder prediction 341 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01417 Spst-Chr2 12891620 12896668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01417 302 828 Trihelix Transcription Factor Family AT5G38560 47.037 1.47e-145 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Spst2g01417 PK_Tyr_Ser-Thr 5.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01417 - - gmx:100807815 731.48