Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01415 ATGGCTGAAGCTGCACTTAAAGGTGTGCTTGGAAAGTTGAGCTCTTTCATTGAAAAAGAGGTAGGACTACTTCTGTTTTTTGATCAAGACATGAAAAGGCTTGCCAGCTTACTCACTGCTGTCAAGGCTACGCTTGAAGATGCGGAGGAGAAACAATTCTCAGACAGATCTATAAAGGATTGGCTGCAGAAGCTGATACATGTAGCTCATGACCTTGATGACATCTTGGACGAGTATGCCTATGAAGAATTGCGGGTGGAATATGAAGGAGTCAACTGTTGTCCATTAGTAATGGTACATAGCTCTTGCTTATCCTCTTTTCATCCTATCCATGTTTATTCCTGTTACAAGATTGCTAAGAAAATGAAAAGCATAAGCGGGAGATTAGATGAAATTGCTAAAGAAAGGAAGAACTTTCATTTGAATGAGACCCCTCGAGAGAAAATAAGTGAATTTGAGTGGCGCCAAACCGGCTCTTTCATCACTGAACCGCGGGATCATGGAAGAGATAAAGATACAAAAACAATTCTAGACTCTTTGATTGGTGATGCTGATGCTTCTCACTGTGAAGATTTGTCAGTTTATCCAATTGTAGGTATAGGCGGACTTGGAAAAACAACACTTGCGCAACTAATCTTCAATCATGAGAAGGTAGTCAACCACTTTGAAGAAAGAATTTGGGTATGCGTGTCCGAAGATTTCAGTTTGAGGAGAATGACAAAAGCTATCATTGAAGCAGCTGGTCATGACTGTAAATATTTAGATTTAGAACCATTACAAAGAAGACTTCGAGATCTGCTTCAAAGAAAAAGGTTTTTGCTTGTTTTGGATGATGTGTGGGACGATGACCAAGAGCATTGGCAGAGGTTGAAATCTGTACTGACTTGTGGGGCAAAGGGTGCTTCCGTCCTGGTTACTACTCGTCTTCCAAAGGTTGCATTAATCATGGGAACAATGCCTCCTCATGAACTATCAGTGTTATCTGAAAATTATTGTTGGGAATTGTTTAAAACCCGAGCGTTTGGACCAAATGAGGTAGAACAGGAAGAGCTTGTGGTTATAGGAAAGGATATAGTAAAGAAATGTGGTGGAGTCCCTCTTGCAGCAACAGCACTGGGAGGTCTTTTACGCTTTAAAAGAGAGGTAAAAGAGTGGGTCTTTGTTAAGGAGAGCAACATGTGGAATTTAACACACGATGACAACTCTGTAATGTCAGCCCTGAGGTTAAGTTACTTGAACTTACCAATAAAGTTCAGACAATGTTTTGCTTACTGTGCAATATTTCCCAAAGGTGAAAGAATACGGAAGAAATATTTAATAGAACTTTGGATAGCTAATGGATTTATTTCATCCAATGAAGTACTAGATGCTGAAGACGTTGGTGATAGTGTATGGAATGAATTATATCTGAGATCATTTTTTCAAGATATTGAGATAGATGAATTTAACAAAATTACGAGTTTCAAGATGCATGATCTTGTTCATGATCTTGCACAATTTGTTGCACAAGATATTTGTTGCATTACAAATGACCATGACGTAACTACTTTGCCCGAAAGAATCCACCATCTCTCAGATCACAGATGGAAGTGGAATTCATCCGCGGAAACCATTAATCCAGTTCTGTTGCATAAAGTCAAGTCTCTAAGGACCTATAGAGAAAGCTCTAATACTGGAAAACTTTGTCCTTCTGAATTGAAATGTTGTTCTTTGCGGGTACTTCACATGGCAAAACTTGGGAAAGAACTGTCAACTTCAATTGGTCATTTAAAACAGCTAAGGTACTTGAACCTTTCTAAAGGTGACTTCAAAACTCTCCCAGAATCACTATGTACATTATGGAATTTGCAGATATTGAAATTAGACTATTGTATATATCTGGAAAAGTTGCCTATCAGTTTGGTACATTTGAAAGGTCTACAACAACTGTCTTTCAAATGTTGTGGGTCACTGTCAAGCTTGCCTCCTCAGATTGGAAAGTTGAATTGTCTAAGAATTTTAAGCTCGTTCTTTGTTGGAAAGGAAAGAGGATTCCATTTGGAAGAACTGGGACAACTGAAGCTTAAAGGATCTCTCTGTATCAAACATTTGGCAAAAGTAAAAAGTGTAGAGGATGCCAAAGATGCCAACATGTCAAGTAAGCAGCTGAAGGAGTTATGGTTGTCATGGGACAGAAATGAAGAGTTGGAATTACAAGAAAATGTTGAGGAGATTCTTGAACTGCTTCAGCCTGATACCCAACAGCTTCAGAAGTTGAGCGTAGAAGGATATAATGGTGCCCGTTTCCCCCAATGGATCTCTAGTCTTTATCTCAAATTTGTAACTTTCATAAAGCTAAAGGACTGCGAAAGATGTTCACAACTTCCAGCTTTGGGGAAACTACCTTCTCTAAAGACTCTACACATAGACAACATGATTAATGTAAAATATGTATACGAGGAGTGTTACAATGGTGGAGTAGTTTTCCAGGCTCTACAACATCTGACACTCTTGAATCTGCCAAATCTAATAACATTATCAAGGGAGGATGGGGAAAACATGTTCCCGCGGGTTTCCATACTTGAAATTGGATCATGTCCTAAATTCTTGGCAGAGGAAGTATTACTGCAAGGATTTCAGTCTCTCAGGAAATTAGATATTAGAGGGTGTGATAAGTTCAATGTGTCAGCAGGTTTCCAATTCCTAATGTGTCTTCAGGATTTGACTATTGGCGGATGCAGAGAGGTGGAGGGCTTACATGAGGCTTTACAGCGTATGATTATCCTGAAGAAGTTAATGTTAGAGAATCTTCCAAATCTAGAATCCTTGCCTGACTGTTTTGGAAACCTCCCCTTACTAGACAGTTTATATATTTTTAACTGTCCAAAGTTAAGGTGTCTTCCAGCAAGTCTAAGCATTAGCCGTCTAGAAAGGTTGTGGATCTGGGGTTGCCCTCCTGAGTTTGCAACTAGATATGAGAGGGAAACAGGAGAGGACTGGCCAAAAATAGCTCACATTCCCCATGTTGAGTTCCGTGTTTTGATTGGTGTAATGACTGTGCAGAAATCTGGCTACATTGAGATCGGTAATTACAGGTTTCCCGCAAGCTGGTTGTTTGGAGATTCTGGTGTTTCTGCCTCTTACTCGGGCTCACAATGA 3138 0.3964 MAEAALKGVLGKLSSFIEKEVGLLLFFDQDMKRLASLLTAVKATLEDAEEKQFSDRSIKDWLQKLIHVAHDLDDILDEYAYEELRVEYEGVNCCPLVMVHSSCLSSFHPIHVYSCYKIAKKMKSISGRLDEIAKERKNFHLNETPREKISEFEWRQTGSFITEPRDHGRDKDTKTILDSLIGDADASHCEDLSVYPIVGIGGLGKTTLAQLIFNHEKVVNHFEERIWVCVSEDFSLRRMTKAIIEAAGHDCKYLDLEPLQRRLRDLLQRKRFLLVLDDVWDDDQEHWQRLKSVLTCGAKGASVLVTTRLPKVALIMGTMPPHELSVLSENYCWELFKTRAFGPNEVEQEELVVIGKDIVKKCGGVPLAATALGGLLRFKREVKEWVFVKESNMWNLTHDDNSVMSALRLSYLNLPIKFRQCFAYCAIFPKGERIRKKYLIELWIANGFISSNEVLDAEDVGDSVWNELYLRSFFQDIEIDEFNKITSFKMHDLVHDLAQFVAQDICCITNDHDVTTLPERIHHLSDHRWKWNSSAETINPVLLHKVKSLRTYRESSNTGKLCPSELKCCSLRVLHMAKLGKELSTSIGHLKQLRYLNLSKGDFKTLPESLCTLWNLQILKLDYCIYLEKLPISLVHLKGLQQLSFKCCGSLSSLPPQIGKLNCLRILSSFFVGKERGFHLEELGQLKLKGSLCIKHLAKVKSVEDAKDANMSSKQLKELWLSWDRNEELELQENVEEILELLQPDTQQLQKLSVEGYNGARFPQWISSLYLKFVTFIKLKDCERCSQLPALGKLPSLKTLHIDNMINVKYVYEECYNGGVVFQALQHLTLLNLPNLITLSREDGENMFPRVSILEIGSCPKFLAEEVLLQGFQSLRKLDIRGCDKFNVSAGFQFLMCLQDLTIGGCREVEGLHEALQRMIILKKLMLENLPNLESLPDCFGNLPLLDSLYIFNCPKLRCLPASLSISRLERLWIWGCPPEFATRYERETGEDWPKIAHIPHVEFRVLIGVMTVQKSGYIEIGNYRFPASWLFGDSGVSASYSGSQ 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01415 1045 PRINTS Disease resistance protein signature 194 209 - -
Spst2g01415 1045 PRINTS Disease resistance protein signature 870 886 - -
Spst2g01415 1045 PRINTS Disease resistance protein signature 362 376 - -
Spst2g01415 1045 PRINTS Disease resistance protein signature 266 280 - -
Spst2g01415 1045 Gene3D - 326 409 IPR042197 -
Spst2g01415 1045 Gene3D - 153 318 IPR027417 -
Spst2g01415 1045 CDD RX-CC_like 2 134 IPR038005 -
Spst2g01415 1045 FunFam Probable disease resistance protein At1g61300 151 320 - -
Spst2g01415 1045 PANTHER DISEASE RESISTANCE PROTEIN RP 40 898 IPR044974 GO:0006952
Spst2g01415 1045 FunFam Probable disease resistance protein At1g63360 411 500 - -
Spst2g01415 1045 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 425 IPR027417 -
Spst2g01415 1045 Pfam NB-ARC domain 191 411 IPR002182 GO:0043531
Spst2g01415 1045 Gene3D Ribonuclease Inhibitor 865 990 IPR032675 -
Spst2g01415 1045 Gene3D Ribonuclease Inhibitor 506 672 IPR032675 -
Spst2g01415 1045 Gene3D Ribonuclease Inhibitor 678 864 IPR032675 -
Spst2g01415 1045 Gene3D - 410 500 IPR036388 -
Spst2g01415 1045 Coils Coil 31 51 - -
Spst2g01415 1045 Gene3D - 4 134 - -
Spst2g01415 1045 Pfam Rx N-terminal domain 6 87 IPR041118 -
Spst2g01415 1045 SUPERFAMILY L domain-like 474 997 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01415 Spst-Chr2 12886320 12890077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01415 191 499 WRKY Transcription Factor Family AT5G45050 25.153 7.78e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01415 - - gmx:102666390 1206.05