Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01391 ATGGAGAGACAAGTTGTTAATTATGGTGGTTTTGAGTACTGTTTGGTTTTCTGGCTATTGGGGCTGCTGCTTCTGCTGTTGATGGAGATTTCATCTGCTGCTCTTTCTCCTTCTGGCGTAAACTATGAAGTTCAAGCTCTGATGGCCATAAAGTATGAGTTGACGGATCCTCACAATGTTCTGGAAAGTTGGGATACGAATTCTGTTGATCCATGTAGCTGGAGGATGATTATGTGTTCCCTTGATGGTTCTGTTTCTACATTGGGATTGCCTAGTCAGAACTTGTCTGGTACACTATCTCCTGGGATTGGAAACCTTACTAATTTACAATCTGTGTTGCTTCAGAATAATGCCATTTCTGGCAGGATTCCTGCTGCAATAGGAAACTTGGAAAAGCTTCAGACACTTGATCTTTCCAATAATACCTTCAGTGGTGAGATACCCAGTTCTTTGGGAGGCCTCAAGAACCTGAATTATTTGAGGTTAAACAATAACAGTCTTACAGGATCCTGCCCTCAATCTCTTAGCAACATTGAAGGTCTAACCCTTGTGGACCTCTCCTACAACAATCTGAGTGGTTCCTTGCCTAGAATATCAGCAAGAACATTAAAGATTGTGGGTAACCCTTTAATTTGTGGTTCAAAAGCAAACAACTGTTCTTCTGTTTTACCAGAGCCACTTTCCTTCCCTCCAGATGCACTAAGAGGCCAATTAGACGCTGGTAAAAAGAGCCATCATGTGGTACTTGCTTTTGGTGCAAGTTTTGGTGCTGCTTTTGTCATTGTGATTATAGTTGGGTTTCTTGTTTGGTGGCGATATAGACACAACCAACAGATATTCTTTGATGTTAATGAACATTATGATCCAGAGGTGCGTCTTGGTCATTTAAAAAGGTTTTCATTCAAAGAGCTTCGAGCTGCAACAGACCATTTCAACTCAAAGAACATTCTAGGAAGAGGTGGCTTTGGAATAGTTTACAAGGCCTGCTTGAATGATGGGTCTGTTGTGGCTGTTAAGAGGTTAAAGGACTATAATGCAGACGGTGGTGAGATCCAATTTCAAACAGAAGTTGAGACGATAAGTTTGGCTGTCCACCGAAATCTTCTCCGGCTTTGGGGCTTTTGCAGTACTCAGCATGAAAGGCTCCTCGTTTATCCATATATGCCTAATGGAAGTGTAGCCTCTAGATTAAAAGATCATATTCATGGCCGGCCGGCATTAGATTGGACTAGGCGGAAGAGAATAGCTTTAGGTACAGCAAGAGGGTTGGTTTACTTGCATGAACAATGCGACCCTAAAATTATTCACCGTGATGTGAAAGCAGCTAACATATTGCTTGATGAAGACTTTGAAGCTGTTGTTGGTGATTTTGGTTTAGCTAAGCTTCTGGATCATAGAGACTCCCATGTGACCACTGCTGTGCGTGGCACTGTTGGTCACATTGCTCCAGAATACCTATCTACTGGCCAATCATCCGAAAAGACTGATGTGTTTGGGTTTGGAATCTTGTTGCTTGAACTGATCACAGGTCACAAGGCTCTAGATTTTGGGCGAGCAGCGAACCAGAAAGGTGTAATGCTTGATTGGGTTAAAAAGCTCCACCAGGATGGAAGATTAAGTCAAATGGTAGACAAAGATCTAAAGGGAAACTTTGATCTGATTGAGTTAGAAGAAATGGTTCAGGTTGCACTCTTGTGCACACAATTCAATCCTTCATACCGCCCCAAGATGTCAGAAGTATTAAAGATGTTGGAAGGGGATGGCTTAGCTGAGAGATGGGAGGCTTCACAGAGGATTGAAACACCAAGGTTTCGGTCTTGTGAGCCTCAAAGATATTCAGATTTAATAGAGGAATCTTCACTCATAGTTGAAGCTATGGAACTTTCTGGCCCTAGGTGA 1899 0.4239 MERQVVNYGGFEYCLVFWLLGLLLLLLMEISSAALSPSGVNYEVQALMAIKYELTDPHNVLESWDTNSVDPCSWRMIMCSLDGSVSTLGLPSQNLSGTLSPGIGNLTNLQSVLLQNNAISGRIPAAIGNLEKLQTLDLSNNTFSGEIPSSLGGLKNLNYLRLNNNSLTGSCPQSLSNIEGLTLVDLSYNNLSGSLPRISARTLKIVGNPLICGSKANNCSSVLPEPLSFPPDALRGQLDAGKKSHHVVLAFGASFGAAFVIVIIVGFLVWWRYRHNQQIFFDVNEHYDPEVRLGHLKRFSFKELRAATDHFNSKNILGRGGFGIVYKACLNDGSVVAVKRLKDYNADGGEIQFQTEVETISLAVHRNLLRLWGFCSTQHERLLVYPYMPNGSVASRLKDHIHGRPALDWTRRKRIALGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGHKALDFGRAANQKGVMLDWVKKLHQDGRLSQMVDKDLKGNFDLIELEEMVQVALLCTQFNPSYRPKMSEVLKMLEGDGLAERWEASQRIETPRFRSCEPQRYSDLIEESSLIVEAMELSGPR 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01391 632 Pfam Leucine rich repeat 107 167 IPR001611 GO:0005515
Spst2g01391 632 FunFam Somatic embryogenesis receptor kinase 1 280 387 - -
Spst2g01391 632 Gene3D Ribonuclease Inhibitor 40 220 IPR032675 -
Spst2g01391 632 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 19 595 - -
Spst2g01391 632 ProSitePatterns Protein kinases ATP-binding region signature. 317 339 IPR017441 GO:0005524
Spst2g01391 632 Gene3D Phosphorylase Kinase; domain 1 280 387 - -
Spst2g01391 632 SMART serkin_6 311 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01391 632 Gene3D Transferase(Phosphotransferase) domain 1 388 603 - -
Spst2g01391 632 SUPERFAMILY L domain-like 41 208 - -
Spst2g01391 632 ProSiteProfiles Protein kinase domain profile. 311 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01391 632 SUPERFAMILY Protein kinase-like (PK-like) 287 585 IPR011009 -
Spst2g01391 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Spst2g01391 632 Pfam Leucine rich repeat N-terminal domain 41 80 IPR013210 -
Spst2g01391 632 FunFam Somatic embryogenesis receptor-like kinase 1 388 604 - -
Spst2g01391 632 FunFam Putative LRR receptor-like serine/threonine-protein kinase 40 221 - -
Spst2g01391 632 Pfam Protein kinase domain 312 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01391 Spst-Chr2 12592073 12597217 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01391 76 632 Receptor kinase-like Gene Family AT1G60800 76.316 0.0 824
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Spst2g01391 Pkinase 1.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01391 - - gmx:100784164 1156.35