Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01387 ATGAGGAAAATAGTCTTTCTCATCACTTTATGCAACCTTGCCCTTCTCATCGATTTACTACTACTATCAAAGATTGTAATAGCAGAACCAAGGGCCAAGACAATCCTGGTAACATGTGGCCATGAACCAGAGCACAATACTACTATCTTTGTTCCGAACTTTGTTGCAACTATGGAGAAGATCAGTGATAAGATGCGCAAAACTGGCTTTGGCACAGCAGTTGTAGGGACAGGACCTGATACTAACTATGGCCTGGCCCAGTGTTATGGAGATCTTTCATTGCTTGACTGTGTATTGTGCTATGCTGAAGCACGCACGGTTCTTCCCCAGTGCTACCCTTATAATTCTGGTCGCATTTTCCTTGATGGTTGCTTCATGAGGGCTGAGAATTATAGTTTCTTTAATGAGTATACAGGACCAGGAGACAAAGCTGTATGTGGGAATACAACCAAGAAGACTTCAAGTTTTCAAGCAGCAGCAAAGCAAGCCGTTTTAAGAGCAGTTCAAGATGCACACAACAACAAAGGATATACAAGTGGGAATGTAGCTGTGGCAGGAGCAACTGACCAATATGTCTATGTTCTGGCTGATTGTTGGAGGACTTTGGACGAAAGGTCTTGCAAAGCATGTCTTGAGAATGCATCTTCTTCCATTTTGGGATGCTTACCCTGGTCCGAAGGGCGAGCCCTCAACACCGGCTGCTTCATGAGGTACTCAGACACAAATTTTCTTAACAAGGAGCAGGAAAATGGGAGTTCAAGAGGTAATGTGGTAGTAATAGTGGTTGCAGTAATTAGTTCGGTGATTGTTTTGGTGGTTGGGGTAACTATTGGAGTTTATATATGGAAACAAAGATACATTCAGAAGAAACGAAGAGGTTCAAATGATGCAGAAAAGTTAGCAAAATCACTTCAAAACAATAGCTTGAACTTCAAGTACTCTACATTGGACAAGGCCACTGGATCTTTTCATGAAAATAACAAGTTAGGGCAAGGAGGATTTGGAACAGTTTATAAAGGAGTTCTAGCTGATGGAAGAGAGATTGCTATCAAGAGGTTATATTTCAACAACAGACATAGAGCAGCAGATTTCTACAACGAAGTCAACATAATTAGTAGTGTGGAGCACAAGAATCTGGTCAGACTGTTGGGATGCAGTTGTTCAGGACCTGAAAGTCTGCTGGTATATGAATTTCTGCCCAATAAAAGTCTTGATCGCTTCATTTTTGATAAAAACAAGGGCAAAGAATTGAACTGGGAAAAGAGATTTGAAATTATCATCGGGACAACCGAAGGACTAGTTTATCTGCACGAGAACTCTAAAACAAGGATAATTCACAGAGATATAAAAGCCAGCAACATCCTATTGGATGCAAAGCTTCGTGCTAAAATTGCAGATTTTGGTTTGGCCAGGTCCTTTCAAGAGGACAAGAGCCACATAAGTACAGCTATTGCAGGAACATTGGGGTATATGGCTCCTGAGTACCTAGCTCATGGTCAATTAACAGAAAAGGCAGACGTATATAGTTTTGGAGTATTGCTGCTAGAGATGGTCACCGGTAGACAGAACAACAGGAGCAAAGCATTAGATTATTCAGACAGCTTAGTTACAGTGGTATGGAAACATTTTCAGGCAGGGACTGCTGAACAATTATTTGATCCAAATCTGGAGTTACAGGAAGACCACAACAGCAACGTTAAGGATGAGATTTTGAGAGTGGTTAACATAGGACTTCTATGCACCCAAGAGGTCCCTTCTTTACGACCAATCATGTCGAAGACATTACAGATGCTAACAAAGAAGGAGGAGACTCTTATTGCTCCCTCTAATCCACCCTTCCTAGATGAGAATACCATGGAACTTCATGACACAAGTGGTGACCCATTTTATCCACTTAATGCATCTGATTCAATTGCTACTATGTCCCATAGCTCTTTTTATCCCAGGTGA 1950 0.4144 MRKIVFLITLCNLALLIDLLLLSKIVIAEPRAKTILVTCGHEPEHNTTIFVPNFVATMEKISDKMRKTGFGTAVVGTGPDTNYGLAQCYGDLSLLDCVLCYAEARTVLPQCYPYNSGRIFLDGCFMRAENYSFFNEYTGPGDKAVCGNTTKKTSSFQAAAKQAVLRAVQDAHNNKGYTSGNVAVAGATDQYVYVLADCWRTLDERSCKACLENASSSILGCLPWSEGRALNTGCFMRYSDTNFLNKEQENGSSRGNVVVIVVAVISSVIVLVVGVTIGVYIWKQRYIQKKRRGSNDAEKLAKSLQNNSLNFKYSTLDKATGSFHENNKLGQGGFGTVYKGVLADGREIAIKRLYFNNRHRAADFYNEVNIISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSLDRFIFDKNKGKELNWEKRFEIIIGTTEGLVYLHENSKTRIIHRDIKASNILLDAKLRAKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVLLLEMVTGRQNNRSKALDYSDSLVTVVWKHFQAGTAEQLFDPNLELQEDHNSNVKDEILRVVNIGLLCTQEVPSLRPIMSKTLQMLTKKEETLIAPSNPPFLDENTMELHDTSGDPFYPLNASDSIATMSHSSFYPR 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01387 649 SUPERFAMILY Protein kinase-like (PK-like) 307 621 IPR011009 -
Spst2g01387 649 SMART serkin_6 323 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01387 649 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Spst2g01387 649 FunFam Cysteine-rich receptor-like protein kinase 2 32 133 - -
Spst2g01387 649 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 83 621 - -
Spst2g01387 649 ProSiteProfiles Gnk2-homologous domain profile. 32 133 IPR002902 -
Spst2g01387 649 Coils Coil 287 307 - -
Spst2g01387 649 ProSiteProfiles Gnk2-homologous domain profile. 138 243 IPR002902 -
Spst2g01387 649 Gene3D Phosphorylase Kinase; domain 1 283 398 - -
Spst2g01387 649 Gene3D - 32 133 IPR038408 -
Spst2g01387 649 Gene3D - 143 243 IPR038408 -
Spst2g01387 649 FunFam Cysteine-rich receptor-like protein kinase 2 399 606 - -
Spst2g01387 649 Pfam Salt stress response/antifungal 49 131 IPR002902 -
Spst2g01387 649 Pfam Salt stress response/antifungal 146 240 IPR002902 -
Spst2g01387 649 CDD STKc_IRAK 329 600 - -
Spst2g01387 649 FunFam Putative DUF26-domain receptor-like protein kinase family protein 291 398 - -
Spst2g01387 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Spst2g01387 649 FunFam Cysteine-rich receptor-like protein kinase 3 142 243 - -
Spst2g01387 649 Pfam Protein kinase domain 323 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01387 649 ProSiteProfiles Protein kinase domain profile. 323 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01387 649 Gene3D Transferase(Phosphotransferase) domain 1 399 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01387 Spst-Chr2 12558249 12561378 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01387 2 649 Receptor kinase-like Gene Family AT1G70520 66.820 0.0 866
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst2g01387 Pkinase 3.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01387 - - gmx:100305420 1153.27