Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01386 ATGTCCCTTGCATCATTTCTGCTTATCTTCATTTTTTATTGTGCTCTTCCTGCTCTAGCTGATCCAAGAGCCACAGAGGTCGCAGTGATGTGCACCAACACAACAGCACCACTGCTTCAACGACAAGCTTTCTTGACAAATTTCTATGATGCCATAGAATCCTTAACCGATTTGATTACAAGCCAAAGATATGCACTAGTTGTTAAAGGGACTACTCAAAATGAATCTGTCTATGCTTTTGGTGAGTGCATGAAAGATCTTTCCAAACCAGATTGTGACGTCTGCTTTGCACAGTGCAAGACACAAGTCCATAGGTGTTCTCCGTTTCAGAGAGGCACTAAAGGGGGCATGTTTTTCTTTGATGGGTGCTATCTTAGGTATGATGGCTATAACTTCTTCAATGAGAGTCTCAGTCCCAGGGACAGGACTGTTTGTGGAACCGAAGATTTTAGTGGGAATTGGAGTGTGTTTAAGGCCAATACCGTGGAGTTCGTGAGAAATTTGAGCATTCAAGCACCAAAGAATGAAGGGTTCTCTGTGGGGTTTGTGAGAAGAAGTAATGTGACTATTTATGGGTTGGCTCAATGCTGGAAGTTTGTGAATGGCAGTTCCTGTCAGAATTGCTTGGCTGAAGCTATCACTAGGATTGATTCATGTGCTCCAAAACAAGAAGGGAAGGCATTAAATGCAGGGTGTTACTTGAGGTATTCCACACACAATTTCTATAATAGTTCAAACAACACAGCCCCTCAAGAACATCAAGGGGACAAAAAAATTGCTATAATTGTGGCAGCGTCATCTGCTTCCTTGGCTCTTCTGCTGATTGTTGCAACTGTGATTTTCCTTGTGTGGACAAATTTACTAAAGCGGAGGAGAGAAAGAAGACAAGTTGGTGTACTTTTGAACACAGTAATCAATTCCAAACTAAATATGCCGTATGAACTTCTTGAAAAAGCCACAGATTACTTCAGTGATTCCAATAAGCTAGGAGAAGGGGGATCAGGATCAGTTTATAAGGGAGCTCTGCCAGATGGAACTACCGTGGCTGTAAAAAGACTTACTTTTAACACATCACAATGGGCAGATCATTTTTTCAATGAGGTCAATTTGATCAGTGGCATTCATCACAAAAATCTAGTGAAGCTTTTGGGGTGCAGCATTACAGGACCTGAAAGCCTCCTTGTTTATGAATTTGTGCCTAATCATAGCCTCTATGATCACCTATCTGGTAGAAGGAATTCTCAGCAGTTGACATGGGAAGTCAGGCACAAAATCATATTGGGAACCGCAGAGGGCTTGGCCTATCTTCATGAGGAATCACAGAGAATCATTCATAGAGATATAAAATTAGGGAACATTCTCATTGATGATAACTTCACACCCAAGATTGCTGATTTTGGACTTGCCAGATTATTTCCAGAAGACAAGTCTCACCTTAGCACAGCCATTTGTGGCACACTGGGTTATATGGCTCCAGAATATGTAGTTCTAGGGAAGCTAACTGAGAAGGCAGATGTCTACAGTTTTGGAGTTCTACTGATGGAAATTATATCTGGCAAAAGGAGCAAATCCTTCATTCAAAATTCATATTCTATCCTACACACGGTTTGGAGCCTTTATGGATCAAACAAACTATGTGACATTGTTGATCCAATCCTAGAGGGAAATTATCCGGCGGAGGAAGCATGCAAACTCCTTAAGATAGGGTTGCTCTGTGCACAAGCATCTGCAGAACTTAGACCACCAATGTCAGTAGTTGTGAAAATGATTAAAAACAATCATGAAATTACTCAGCCAACACAACCCCCCTTTCTTAATTGCAGTAGTGCAGAATTCAGCAAATCTATTTTACCGGAAGACAGTTTTCAGCCTAGATCCTACCCTCAATCTTCAGAGGAAAGCATGACAGAAGGCCTGATTCAGCATAAATGGGTTACAATATAA 1944 0.4126 MSLASFLLIFIFYCALPALADPRATEVAVMCTNTTAPLLQRQAFLTNFYDAIESLTDLITSQRYALVVKGTTQNESVYAFGECMKDLSKPDCDVCFAQCKTQVHRCSPFQRGTKGGMFFFDGCYLRYDGYNFFNESLSPRDRTVCGTEDFSGNWSVFKANTVEFVRNLSIQAPKNEGFSVGFVRRSNVTIYGLAQCWKFVNGSSCQNCLAEAITRIDSCAPKQEGKALNAGCYLRYSTHNFYNSSNNTAPQEHQGDKKIAIIVAASSASLALLLIVATVIFLVWTNLLKRRRERRQVGVLLNTVINSKLNMPYELLEKATDYFSDSNKLGEGGSGSVYKGALPDGTTVAVKRLTFNTSQWADHFFNEVNLISGIHHKNLVKLLGCSITGPESLLVYEFVPNHSLYDHLSGRRNSQQLTWEVRHKIILGTAEGLAYLHEESQRIIHRDIKLGNILIDDNFTPKIADFGLARLFPEDKSHLSTAICGTLGYMAPEYVVLGKLTEKADVYSFGVLLMEIISGKRSKSFIQNSYSILHTVWSLYGSNKLCDIVDPILEGNYPAEEACKLLKIGLLCAQASAELRPPMSVVVKMIKNNHEITQPTQPPFLNCSSAEFSKSILPEDSFQPRSYPQSSEESMTEGLIQHKWVTI 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01386 647 CDD STKc_IRAK 329 592 - -
Spst2g01386 647 FunFam Cysteine-rich receptor-like protein kinase 2 399 598 - -
Spst2g01386 647 Gene3D Transferase(Phosphotransferase) domain 1 399 602 - -
Spst2g01386 647 SMART serkin_6 323 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01386 647 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Spst2g01386 647 Pfam Protein kinase domain 324 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01386 647 ProSiteProfiles Gnk2-homologous domain profile. 138 241 IPR002902 -
Spst2g01386 647 SUPERFAMILY Protein kinase-like (PK-like) 309 624 IPR011009 -
Spst2g01386 647 FunFam Cysteine-rich receptor-like protein kinase 2 289 398 - -
Spst2g01386 647 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 78 621 - -
Spst2g01386 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Spst2g01386 647 Gene3D Phosphorylase Kinase; domain 1 284 398 - -
Spst2g01386 647 Gene3D - 24 132 IPR038408 -
Spst2g01386 647 Gene3D - 141 241 IPR038408 -
Spst2g01386 647 ProSiteProfiles Gnk2-homologous domain profile. 25 132 IPR002902 -
Spst2g01386 647 ProSiteProfiles Protein kinase domain profile. 323 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01386 647 Pfam Salt stress response/antifungal 39 128 IPR002902 -
Spst2g01386 647 Pfam Salt stress response/antifungal 149 238 IPR002902 -
Spst2g01386 647 FunFam Cysteine-rich receptor-like protein kinase 3 141 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01386 Spst-Chr2 12551870 12554961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01386 17 487 Receptor kinase-like Gene Family AT1G70530 57.717 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst2g01386 Pkinase 4.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01386 - - gmx:100802190 1113.21