Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01367 ATGTTGTGCGTTTGTGGTGAAGCTAAGGAACAACAAGTATATTCAACGCTGAAGCTGAAGCAACATCAACCATGTGATTTCCCTCTTCTTTCTTCTCCCATTCTGATGGTCCACAACAACATACACACTCCTCTCAAGCTCCCACCGTTATCCCATCCCCATCTTCCTCTTCCCACGCCATTTCCCACCATGCCTCTTCTACTTGCTCGCAACCCACCTTCTTCACTTCCTCCAATCCCTCCTCGCCTCTACAACAGCAACAACCACAACAACCACAACAACAAGCTTCTAATAGCACCTTCTCAGAAGCGCTTCCCTCTCACCGCAACGCCAATTGTTCTCTTCGCTCCCCGGCGCATTCTAGCATCACCTCCTCTGAAGTGCGCCTCTATCAATGGAGTCTCCGTTCAGAACAATCCAGAAGCTTCCGCAGAACAAGTCTATGTCGGTGAGTTACTTGAGAGGATTCGTAAATGGGTCGGCTTTTTACCGTCGCTTCTCCCCGGCGGACGGTGGTGGGACTTCTCCGACGACATCGACGTTCAGATGGTGGCGCAGCCGGTGACCGTGTGGCGCGCTCTAGGCAAAATGTGGGAACTTGTGGCGCGTGATAGATGGGTCATCTTCGCTGCTTTCTCTGCTCTCATTGTTGCTGCAGTTTCGGAGATTTCCATTCCTCATTTCTTGACGGCGTCCATCTTCTCGGCACAGGGTGCGGACCTTACTGTTTTTCATCGGAATGTGCGTTTGTTGGTTCTGTTGTGCGTGACTTCGGGAATATGCAGTGGGATACGAGGTTGCTGTTTTGGCATAGCAAACATGATTCTGGTTAAGAGAATGAGAGAAACGCTATACTCTTCTCTTCTTCTGCAGGATATATCGTTTTTTGACAATGAAACCGTTGGTGATTTGACAAGTAGGCTTGGGGCGGATTGTCAACAAGTGTCCAGGGTTATTGGAAATGATCTTAACTTGATATTGCGCAACTTTCTTCAGGGGGGAGGTTCATTGATCTACTTGTTGATTTTATCTTGGCCACTTGGTTTATGTACATTGGTGATATGCTCCATATTGGCAGCAGTTATGCTACGTTACGGAAGGTACCAGAAAAAGGCAGCAAGGTTGATCCAAGAAGTCACTGCTTCTGCAAACGATGTAGCTCAAGAGACATTCTCTCTTATTAGAACTGTACGAGTTTATGGAACAGAAGAAGAAGAATACGGAAGGTATCAATGGTGGCTGGGGAAATTAGCTGACATCAGCTTGCGCCAAAGTGTTGCTTATGGAGTTTGGAATTTTAGCTTTAACATCCTTTATCATTCAACTCAGGTTATTGCTGTGCTATTTGGAGGAATGTCTATTCTAGCGGGTCATATCACAGCTGAGAAACTTACCAAGTTTATTCTATACAGTGAATGGTTGATCTACTCTACCTGGTGGGTGGGAGACAATGTATCCAATTTGATGCAATCAGTTGGGGCTAGGATAAAGTTGCAGAGGTTAACAGGGCATATTGAGTTTCTAAATGTATCTTTTCACTATCCTTCAAGGCCAACGGTATCTGTAGTGCAACATGTAAGCTTTGCTGTACATCCTAGTGAGGTGGTTGCAATAATTGGACTTAGTGGTAGTGGAAAAAGCACGTTGGTGAATCTTTTGCTCCGTCTATATGAGCCTACAGATGGTCAGATTTTGATAGATGATATCCCTATTAAAGACTTGGACATCGTGTGGTGGAGAGAGAGAATTGGATATGTGGGCCAGGAACCCAAACTCTTCCGGATGGATATTAGTTCAAACATCAGATATGGATGTACACGAGATGTAAAGCAGGAGGATATTGAATGGGCTGCAAAACAAGCCTATGCCCACGACTTTATCTCAGCACTTCCCAATGGTTATGAAACACTTGTTGATGATGATCTGTTAAGTGGAGGACAAAAGCAGCGAATTGCTATTGCTAGGGCCCTTCTTAGGGACCCAAAAATATTGATCCTTGATGAAGCCACTAGTGCACTAGATGCTGAAAGTGAGCATAATGTCAAGGGTGTTCTTCGATCTGTGAGAAGTGATTCTGCAACCAGAAGTGTCATAGTCATTGCACACAGGTGA 2112 0.4536 MLCVCGEAKEQQVYSTLKLKQHQPCDFPLLSSPILMVHNNIHTPLKLPPLSHPHLPLPTPFPTMPLLLARNPPSSLPPIPPRLYNSNNHNNHNNKLLIAPSQKRFPLTATPIVLFAPRRILASPPLKCASINGVSVQNNPEASAEQVYVGELLERIRKWVGFLPSLLPGGRWWDFSDDIDVQMVAQPVTVWRALGKMWELVARDRWVIFAAFSALIVAAVSEISIPHFLTASIFSAQGADLTVFHRNVRLLVLLCVTSGICSGIRGCCFGIANMILVKRMRETLYSSLLLQDISFFDNETVGDLTSRLGADCQQVSRVIGNDLNLILRNFLQGGGSLIYLLILSWPLGLCTLVICSILAAVMLRYGRYQKKAARLIQEVTASANDVAQETFSLIRTVRVYGTEEEEYGRYQWWLGKLADISLRQSVAYGVWNFSFNILYHSTQVIAVLFGGMSILAGHITAEKLTKFILYSEWLIYSTWWVGDNVSNLMQSVGARIKLQRLTGHIEFLNVSFHYPSRPTVSVVQHVSFAVHPSEVVAIIGLSGSGKSTLVNLLLRLYEPTDGQILIDDIPIKDLDIVWWRERIGYVGQEPKLFRMDISSNIRYGCTRDVKQEDIEWAAKQAYAHDFISALPNGYETLVDDDLLSGGQKQRIAIARALLRDPKILILDEATSALDAESEHNVKGVLRSVRSDSATRSVIVIAHR 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01367 703 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 505 702 IPR003439 GO:0005524
Spst2g01367 703 PANTHER ABC TRANSPORTER B FAMILY 203 703 IPR039421 -
Spst2g01367 703 ProSitePatterns ABC transporters family signature. 643 657 IPR017871 GO:0005524|GO:0016887
Spst2g01367 703 SMART AAA_5 532 702 IPR003593 GO:0016887
Spst2g01367 703 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 209 490 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst2g01367 703 Pfam ABC transporter 524 671 IPR003439 GO:0005524
Spst2g01367 703 CDD ABC_6TM_TAP 211 494 - -
Spst2g01367 703 Gene3D ABC transporter type 1, transmembrane domain 191 499 IPR036640 GO:0005524|GO:0016020
Spst2g01367 703 Gene3D - 500 703 IPR027417 -
Spst2g01367 703 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 497 703 IPR027417 -
Spst2g01367 703 Pfam ABC transporter transmembrane region 210 475 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst2g01367 703 FunFam ABC transporter B family member 28 497 703 - -
Spst2g01367 703 FunFam ABC transporter B family member 26, chloroplastic 190 506 - -
Spst2g01367 703 SUPERFAMILY ABC transporter transmembrane region 197 655 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01367 Spst-Chr2 12352967 12360020 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01367 279 703 Calmodulin-binding Proteins AT2G36910 32.237 6.39e-57 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01367 - - vra:106777591 1135.94