Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01360 ATGGAAGATGCAATGAGGCGCCTCAACGGTGTGGCTCCGATTTCCGGACCCGACCCGAAAGAGTCATCCGTCGGTGAAAACACTAGGCGGCCCACCGCCGTCAACAAGCGAACTTTGAGAGAAGACAGCGGCGGAGCCATGAGGTATCGTGGCGTGAGGCGCAGGCCGTGGGGTCGTTATGCCGCCGAGATTAGAGACCCTCAGAGTAAGGAGCGACGGTGGCTGGGAACCTTCGACACGGCGGAGGAAGCCGCCTGTGCCTATGACTGCGCCGCCAGGGCCATGCGCGGTCTCAAAGCACGCACCAACTTCGTATACCCAACTTCTCCGCAACCTTCCTCCGCCACCACCGAACACTTCTTCCATTCTTTTAATAAGAACAACTTCCCCAAACACTCTACGTCACCACCCTTCACCAATATTCGTAGCCGCAACTTAACCGGTTCCGCCACCTGCTTTGGCCACCCTAGCGCCGTTGACTTTTCGTTTTGCAACCCGCGGAACCCTTCTTCTCCACTCAACATACTTCTTCTTCGCGACCTCATTAACTCTTCCTCAAACAACCCTTCTTTGCTTTCATCTTCCACTCACAACTTCCACGACCAGTTGTACAACAAGGGTGCTTCTAATATTTCATCGTTACCTTCTGTTTCTTCATCTTCTTCACCTCTCACTCCTAGTTATTCGGTGAATACTTCTTTTGAAGGTTCCTCTTCTGTTAATGTGAAAACCCTATGTGGAACTAATTTGACTGAACAAGGTGATGATGATTGTGGCTCTGGATTTTTCTCTCGTGAGTCTTCGGATTCGGGGCTGTTGGAAGAGATAGTTAACAAGTTCTTGCCCAAAACGAAGCCTAATAAATGCGACAGTTTGCCAAAAATGGAGTTTTTCCGAAACCCTCAGGAGTCTGTTCTCCCTTCACTTATTTCTGAATCAACAGTTGTTTCCACCGCGCAATGCCATGATGACACGAAAAAGGGGTTCCAGAAGAATGAAAGTTTCGGTGTGTCTTTTGATCATCAGGGTTTTCCCATGCAGAAATTTAACAGTTTTAATGGGTTTAATAGCGTGCAGGGTATGGCTCTGGGGAATGAACAAACCATGGCGAATCATGCAGAGAATTGCATAGTTGAAGATGTTTTTCAGTACCAAGAGCTTCTTAATTCTTTTGCCATCAGGATGCAAAATGCTTAA 1197 0.4829 MEDAMRRLNGVAPISGPDPKESSVGENTRRPTAVNKRTLREDSGGAMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVYPTSPQPSSATTEHFFHSFNKNNFPKHSTSPPFTNIRSRNLTGSATCFGHPSAVDFSFCNPRNPSSPLNILLLRDLINSSSNNPSLLSSSTHNFHDQLYNKGASNISSLPSVSSSSSPLTPSYSVNTSFEGSSSVNVKTLCGTNLTEQGDDDCGSGFFSRESSDSGLLEEIVNKFLPKTKPNKCDSLPKMEFFRNPQESVLPSLISESTVVSTAQCHDDTKKGFQKNESFGVSFDHQGFPMQKFNSFNGFNSVQGMALGNEQTMANHAENCIVEDVFQYQELLNSFAIRMQNA 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01360 398 MobiDBLite consensus disorder prediction 1 47 - -
Spst2g01360 398 FunFam Ethylene-responsive transcription factor 2 47 106 - -
Spst2g01360 398 SMART rav1_2 48 111 IPR001471 GO:0003700|GO:0006355
Spst2g01360 398 MobiDBLite consensus disorder prediction 33 47 - -
Spst2g01360 398 PRINTS Ethylene responsive element binding protein signature 49 60 IPR001471 GO:0003700|GO:0006355
Spst2g01360 398 PRINTS Ethylene responsive element binding protein signature 71 87 IPR001471 GO:0003700|GO:0006355
Spst2g01360 398 Gene3D AP2/ERF domain 47 106 IPR036955 GO:0003700|GO:0006355
Spst2g01360 398 ProSiteProfiles AP2/ERF domain profile. 48 105 IPR001471 GO:0003700|GO:0006355
Spst2g01360 398 Pfam AP2 domain 48 97 IPR001471 GO:0003700|GO:0006355
Spst2g01360 398 SUPERFAMILY DNA-binding domain 48 105 IPR016177 GO:0003677
Spst2g01360 398 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 33 236 - -
Spst2g01360 398 CDD AP2 48 104 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01360 Spst-Chr2 12293243 12294439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01360 1 283 AP2-EREBP Transcription Factor Family AT1G24590 35.644 9.72e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Spst2g01360 AP2 3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01360 - - vum:124821082 640.188