Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01346 ATGGACGAGATTAGAGTGCCTCAATCTGTAGATTTACAGGTTGGGGAGCCAAAGTTTGTGTTTGAAGCTAAAACCATTCAAAAAATGGAACTACTGGTTTTAAGCAAATTGAGATGGAAAATGTGTGCATTAACTCCTTTTTCCTTCATAGACTACTTTCTTTGCAAGATCACTTGCGAGCAGCACCCAGCAAAATCATACATTGCAATATCAGTGCAGCTCATCCTCAGTATAATCAGAGGTATTGACTTCTTGGAATTCCGGGCTTCTGAAATTGCTGCCGCAGTGGCAGTTTCTGTTTTAGGAGAATCACAAGCAAAAGATATCGATAAGGCCATTGCTGATCTCTTTATAGTAGAGAAGGGTAGAGTTCTAAAGTGTGTTGAATTGATAAGAGATTTGTTCTTGAACAACGTTGCCGCTAGCAGCAAGGTGCCACAGTTGCCCCAAAGTCCTATTGGGGTGCTGCTGGATGCTGGGTGCTTAAGTTATAAGAGTGATGAATTAACAGTTGGATCATGTCTAAATTCCTCACATGATAGTCCAAATCCAATCACTAAGAGTAGCAAACCAGATGGACCTTCTAATGGAACCTCCAAGTGA 603 0.4113 MDEIRVPQSVDLQVGEPKFVFEAKTIQKMELLVLSKLRWKMCALTPFSFIDYFLCKITCEQHPAKSYIAISVQLILSIIRGIDFLEFRASEIAAAVAVSVLGESQAKDIDKAIADLFIVEKGRVLKCVELIRDLFLNNVAASSKVPQLPQSPIGVLLDAGCLSYKSDELTVGSCLNSSHDSPNPITKSSKPDGPSNGTSK 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01346 200 PANTHER CYCLINS 18 138 IPR039361 -
Spst2g01346 200 Pfam Cyclin, C-terminal domain 45 141 IPR004367 -
Spst2g01346 200 FunFam D6-type cyclin 33 129 - -
Spst2g01346 200 CDD CYCLIN_AtCycD-like_rpt2 45 131 - -
Spst2g01346 200 MobiDBLite consensus disorder prediction 175 200 - -
Spst2g01346 200 Coils Coil 200 200 - -
Spst2g01346 200 SMART Cyclin_C_2 44 168 IPR004367 -
Spst2g01346 200 Gene3D - 22 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01346 Spst-Chr2 12154462 12155393 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01346 1 174 Core Cell Cycle Gene Families AT2G22490 47.849 7.17e-42 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01346 K18810 - gmx:100794010 294.278