Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01342 ATGGCCAATACCCAATCTTTCAGAAACACAATATTTCAACTCCTAATCCATCCTTGGCTATGGAGGGTCACGGGATTCGGGTCAAGCATTGTCGGGTTCACCTGCTATGCCTTAAGCCCCTCATTCCAATATTTGTTCGGACATTGGAGCACGCTGAAGATCGTAATTTACAGCATGGTATGCTCACTTTTCAGTATCATGATGCTTTTCGTTCACCGATTCAGAGGGCAACGTGAAAGGAGCATCTTGTTGAAAACACATGTGGGTTATGTGGTCTTAACGCTTACCTCTGTGTGGTCGTTTTTAGAAGACCGTAGTGAAGAAGGGAAAGTGGAAAAAGGGCACGGGAAAATGATGGACGCGATCTCATGTGGGGCATTTAGCTGGATGGCTTTGAGCTTGTCGAGACAACTCCGAGTTGGATTCGAAGTTGGGGTGTCTAACTTCTTTGCTGGATGCTTCTTGGTGACTGTGATGAAGATGAGCTTAAAGTTAGGTCTGCTCGCAGCATTGTTCTGCTATTTGCTTATCAACGTCCGTTCCATTTCTGATTTCCTGCTTCAATTGCATGCACGTCATACCACACAACATGGAGATGGCAACAGTACTCAATCTGTCCACCAGAATCCAGTAGTGGCTAATTTCGTAGATTTGGAAGCAAATGCTGATGTCTTAGCCCGTGATACTCTTGGTGAAAGAGCGAGTGTCACGGAAAACAACGAATGGACGGCACAGAGCTATAACCCCTCTGAAGCTATGGATGAAGAAGGTGGTGGTGAAAACCTTCACGCAGGGTCATCATTAGAAGACGCAGGGACAATGACCTCTTCTACAGATGAGTCTTCGATTAGGCTTCTAGAACAGGAGAGAGAGTGGACGGAGGCAGATGATGAACCTGGGGTGTACATCACAATCAAGCAATTAGCTGATGGAACAAAGGAGCTTCGCCGTATCAGATTCAGCCGGAGGAGATTTGAGGAGGCCGCAGCAGAGATATGTCTTCCCAGAAATACCATTAGTGAAGGTCTCATGGCACTCTCAAACCATGCAAGGCCAGAATTTGCTTTTGTGGTGACTCCATTTCAGCCCGAAGGCTCTAACGATATTGGGAGGACAACTTCAGGAAATGGTGCATCCGCGTCATCCATGGTTAGACTGGGAGGCAGTGAGACAACATTAGAACCAACTGTCAAGGATTTGTTGAGTTGTGATACATGA 1218 0.4647 MANTQSFRNTIFQLLIHPWLWRVTGFGSSIVGFTCYALSPSFQYLFGHWSTLKIVIYSMVCSLFSIMMLFVHRFRGQRERSILLKTHVGYVVLTLTSVWSFLEDRSEEGKVEKGHGKMMDAISCGAFSWMALSLSRQLRVGFEVGVSNFFAGCFLVTVMKMSLKLGLLAALFCYLLINVRSISDFLLQLHARHTTQHGDGNSTQSVHQNPVVANFVDLEANADVLARDTLGERASVTENNEWTAQSYNPSEAMDEEGGGENLHAGSSLEDAGTMTSSTDESSIRLLEQEREWTEADDEPGVYITIKQLADGTKELRRIRFSRRRFEEAAAEICLPRNTISEGLMALSNHARPEFAFVVTPFQPEGSNDIGRTTSGNGASASSMVRLGGSETTLEPTVKDLLSCDT 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01342 405 ProSiteProfiles BRX domain profile. 290 348 IPR013591 -
Spst2g01342 405 MobiDBLite consensus disorder prediction 237 283 - -
Spst2g01342 405 PANTHER PROTEIN BREVIS RADIX-LIKE 1 193 337 IPR044532 -
Spst2g01342 405 Pfam Transcription factor regulating root and shoot growth via Pin3 289 331 IPR013591 -
Spst2g01342 405 MobiDBLite consensus disorder prediction 268 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01342 Spst-Chr2 12126956 12132723 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01342 223 337 Major Intrinsic Protein MIP AT1G31880 41.270 6.38e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01342 - - gmx:102668650 259.225